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Name : Sden_3566 (Sden_3566) Accession : YP_564564.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4281123 - 4283105 bp Length : 1983 bp Strand : - Note : - DNA sequence : ATGATCCCTGAACTTGGCCATTTCTCGCTGATCTTAGCGTTGGCATTTGCACTGTTACTTGCCACTGTGCCCTTGATAGG TGCAGCCTGCAGAGATCAATATCTAGTGCGCTATGCTCGGCCCCTATGTTACGGCATGTTCGCTTTTGTCAGTCTATCAA TTATTAGTTTAGGTTATAGCTTTGCGGTGGATGATTTCTCCGTTGCCTATGTGGCTCATCACTCTAACTCCCAGTTACCT ATTTTCTTCAAAATTTCAGCAGTGTGGGGCGGACACGAAGGCTCACTACTGTTTTGGGTGTTTGCACTTTCAGTATGGTC TGTGGCCGTCGCATTATTCAGTAAGCAGATTGAAGAAGTGTTCACCGCTAGGGTGTTGTCGGTACTGGCGATAGTGATTG TTGGTTTTACCTTCTTTATGTTACTTACCTCTAACCCTTTCGAGCGGCTTTTTCCTATTCCTATGGAAGGCCGAGATTTG AATCCTATGTTGCAAGATATTGGGCTTATCTATCATCCTCCTATGCTTTATATCGGTTATGTAGGCTTTGCCGTTAGCTT TGCTTTTGCGATTGCAGCATTAATGAGTGGCCGACTCGATTCAGCATGGGCGCGCTGGACTCGTCCATGGACTCTCGCTG CTTGGGTATTTCTCACCGGAGGTATAGCGTTAGGTTCTTGGTGGGCTTATTACGAACTCGGTTGGGGTGGTTGGTGGTTC TGGGACCCCGTGGAAAACGCTTCCTTTATGCCGTGGCTCGTGGGTACCGCATTAGTACACTCATTGATAGTGACAGAGAA GCGCAGTGCCTTTAGAAACTGGACTGTACTACTGTCGATATCAGCATTTTCATTGAGTTTGCTGGGCACCTTTATTGTTC GTTCTGGGGTGCTGACTTCAGTGCATTCATTTGCATCCGATCCTAGTCGTGGGGTGTTTATTCTATTACTGCTCGCCTTG ACTGTTGGCGGCTCACTAACCCTATTTGCTTTTAGAGCTAGCGATATGGCAAGTCCTGCACGTTTTGAGCTTAAATCAAA AGAGACTATGCTGCTTATCTGTAATGTTTTGCTCGCCGTTGCAACCGGTACCGTTTTACTGGGTACCCTTTATCCTCTAC TGATTGATGCTTTAAACATGGGCAAGATCTCCGTAGGCCCACCTTATTTTAATGCGGTGTTTGTGCCTTTGGTGCTTATC TTGTTTGGCTTTATGGGTATAGGTCCGATTATTCGTTGGAAAAAATCTAAAGCTGGCGAGCTCAAGCGTCAACTGCTATT GCCTGCAATGATAGCGGTAGCCTTAGGCGTTACACTGCCATTTATCATTGCTGAAGGTGAATTCGATATCTGGGTTGCAT TTGGTTTAGGCATGGCAAGTTGGATAATCTTAGCTACTTTCAGGGCTGGTTATAATATGGCGCGAGGAAGTAGCTCGAAT ATTGATCTTCGCCGCATAGGCAGAAGCCAATGGGGTATGATCATCGCCCACTTAGGTATTGCCGTCTCAGTGATTGGCGC GACTATGGTGTCTAATTACTCCATCGAGAAAAGTGTGCGTATGGGGCCAGGCGTGAGCTATGAATTAGCAGGCTACCAAT TTAAGTTTATCGATACTCGTCATATTGTCGGCCCTAACTATACCGCTGAACAAGCTCAGATAGAGATTTATCAGCAGGGC GAGTTTGTGGCTTTAGTACAGCCAGATAGACGTCAATATAATGTACGTACCATGGATATGACTGAAGCCGGTATCGATTG GGGGCTGTTTAGGGATCTTTATGTGACTATGGGTGATCCCATCAGCACTACGGAATTTGCGGTGCGGTTAAATTATAAGC CTTTTGTGCGCTGGTTATGGTTTGGTGCGATTTTCATGATGGTCGGCGGACTATTAGCTGCGTCAGACAAGCGCTATCGT CGTAAAGTGAGCGTTGCACAAGCGGACACTCACGCTAATCCTAAATTCGCACCAGCGCTATAA Protein sequence : MIPELGHFSLILALAFALLLATVPLIGAACRDQYLVRYARPLCYGMFAFVSLSIISLGYSFAVDDFSVAYVAHHSNSQLP IFFKISAVWGGHEGSLLFWVFALSVWSVAVALFSKQIEEVFTARVLSVLAIVIVGFTFFMLLTSNPFERLFPIPMEGRDL NPMLQDIGLIYHPPMLYIGYVGFAVSFAFAIAALMSGRLDSAWARWTRPWTLAAWVFLTGGIALGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALVHSLIVTEKRSAFRNWTVLLSISAFSLSLLGTFIVRSGVLTSVHSFASDPSRGVFILLLLAL TVGGSLTLFAFRASDMASPARFELKSKETMLLICNVLLAVATGTVLLGTLYPLLIDALNMGKISVGPPYFNAVFVPLVLI LFGFMGIGPIIRWKKSKAGELKRQLLLPAMIAVALGVTLPFIIAEGEFDIWVAFGLGMASWIILATFRAGYNMARGSSSN IDLRRIGRSQWGMIIAHLGIAVSVIGATMVSNYSIEKSVRMGPGVSYELAGYQFKFIDTRHIVGPNYTAEQAQIEIYQQG EFVALVQPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISTTEFAVRLNYKPFVRWLWFGAIFMMVGGLLAASDKRYR RKVSVAQADTHANPKFAPAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-141 | 53 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 6e-124 | 52 |
