Gene Information

Name : RPD_3328 (RPD_3328)
Accession : YP_570453.1
Strain : Rhodopseudomonas palustris BisB5
Genome accession: NC_007958
Putative virulence/resistance : Virulence
Product : regulatory protein TetR
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 3687608 - 3688171 bp
Length : 564 bp
Strand : +
Note : -

DNA sequence : 
ATGACGACCCCATACACGCGAAAGAAGCAGCCCGACCTGATCCGCCGCACCTTGCTAGAATGCGCAGCGAAGCTCGCCAT
CGAGCGCGGAGTGGCTGGGATCACGATCCAGGCCGTCGCCGACGCCGCCGGGGTGACCAAAGGCGGGCTGTTCCACCATT
TCCCGAACAAGCAGGCGCTCGTCGAGGGCGTCTTTGTCGACCTGCTGCATCAGTTGGATTCGGCGATCGATGCGCGTATG
CAAGAAGACGAAGAGCCGTATGGCAGCTTCACGCGCGCGTATGTCGAAGTCACGTTCGAGGAATTCGAGCTTGGAAAAAC
CGGGCCAGCAGCTGCGATCACACTGTCGATGCTGGCTGAGCCGACGCTGGCACGCCGTCTTGAAGACTGGCTTCAAGATC
GCGCCCGGCGCCACAGCGAGACCGATCCTGGCCCCATCATGCCGATCATACGGTTCGCCGCGGATGGGATGTGGCTTCTT
CACGCACTGCGAGCCACCGGCGCTCCATCGCCGATCCCGCTCAGCCTGCGCAACGAACTCGTCGCCATGACACGCCCGCG
CTGA

Protein sequence : 
MTTPYTRKKQPDLIRRTLLECAAKLAIERGVAGITIQAVADAAGVTKGGLFHHFPNKQALVEGVFVDLLHQLDSAIDARM
QEDEEPYGSFTRAYVEVTFEEFELGKTGPAAAITLSMLAEPTLARRLEDWLQDRARRHSETDPGPIMPIIRFAADGMWLL
HALRATGAPSPIPLSLRNELVAMTRPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42082.1 hypothetical protein Not tested PAI II 536 Protein 3e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPD_3328 YP_570453.1 regulatory protein TetR VFG1601 Protein 1e-24 42