|
Name : RPD_4137 (RPD_4137) Accession : YP_571257.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : D-lactate dehydrogenase (cytochrome) Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.2.4 Position : 4605919 - 4607412 bp Length : 1494 bp Strand : - Note : - DNA sequence : ATGACCATATTGATGCCGGAACCGGACCAGTCCGTGCTGGCGCGCCGCGACCAGATCGTGGCGGCGTTGCGCAAGATCGT GCCGGGCGAGGGCGTCATTTCCAGCGCCGCCGAGATGAAGCCCTATGAGTCCGACGGGCTGATGGCGTATCGCCAGCCGC CGATGGTGGTGGTGCTGCCGGGCACGACGCAGCAGGTCTCCGAGGTTCTTCGCTACTGCCACAAGCACGGCATCAAGGTG GTGCCGCGCGGTTCTGGCACCTCGCTATCGGGCGGCGCTTTGCCGCTCGCCGACGGCGTGTTGCTGGGGCTCGGCAAGTT CAAGCGCATCCGTGAGATTGATTTCGATAACCGCGCAGTGGTGGTCGAGCCCGGCGTCACCAACCTCGCCATCAGCCAGG CAGTCGACCACGCCGGCTTTTACTACGCGCCCGATCCGTCGTCGCAGATCGCCTGTTCGATCGGCGGCAATATCGCGGAG AATTCCGGCGGCGTGCATTGCCTGAAATACGGCATGACCACCAATAACGTGCTCGGCTGCGAGATCGTGCTGATGACCGG CGAGATCCTGCGGATCGGCGGCAAGGCTGCCGAGTGCGCGGGCTACGATCTGATGGGCGTGATCACCGGCTCCGAGGGGC TGCTCGGCGTCATCACCGAGGTCACCGTCCGCATCCTGCGCAAGCCGGAGACCGCGCGGGCGCTGATGGTCGGCTTCACC GACGTCGAGGCCGCCGGCCGATGCGTCGCCGACATCATCAGCGCCGGCATCATCCCCGGCGGCATGGAGATGATGGACCG GCCGGCGATCCACGCCGCCGAAGCCTTCGTCCACGCCGGCTATCCGCTCGACGTCGAGGCGCTGCTGATCATCGAGCTCG ACGGCCCGCAGGTCGAGGTCGACGAACTGATCACGCGCGTCGAGACGATTGCGCTCGGCTGCGGCTCGACCACCTGCCAG ATCTCGACGTCGGAAAAGGAGCGGTTGCTGTTCTGGTCCGGCCGCAAGGCGGCGTTCCCGGCGGTCGGCCGGATTTCGCC GGACTATCTGTGCATGGACGGCACCATTCCGCGCGCGAAGTTGCCGCAGGTATTGCGGCGGATGACCGAGATGTCGGAGC ACTACGGGCTGCGCGTCGCCAATGTGTTCCACGCCGGCGACGGCAATCTGCATCCGCTGATCCTCTACGACGCCAATCAG CCCGGCGAGATGGACAAGGCCGAGGCGTTCGGGGCCGACATCCTGCGGCTGTGCGTCGAGGTCGGCGGCGTGCTGACCGG CGAGCATGGCGTCGGGATCGAGAAGCGCGATCTGATGCCGGAGATGTTCTCCGACATCGATCTCAATCAGCAGCAGCGGT TGAAATGCGCATTCGATTCCGAAGGCCTGCTCAATCCCGGCAAGGTGTTCCCGACGCTGCATCGCTGCGCCGAACTCGGC CGGATGCACGTCCATGGCGGCAAGACGGCGTTTCCGGATATCCCGCGTTTCTGA Protein sequence : MTILMPEPDQSVLARRDQIVAALRKIVPGEGVISSAAEMKPYESDGLMAYRQPPMVVVLPGTTQQVSEVLRYCHKHGIKV VPRGSGTSLSGGALPLADGVLLGLGKFKRIREIDFDNRAVVVEPGVTNLAISQAVDHAGFYYAPDPSSQIACSIGGNIAE NSGGVHCLKYGMTTNNVLGCEIVLMTGEILRIGGKAAECAGYDLMGVITGSEGLLGVITEVTVRILRKPETARALMVGFT DVEAAGRCVADIISAGIIPGGMEMMDRPAIHAAEAFVHAGYPLDVEALLIIELDGPQVEVDELITRVETIALGCGSTTCQ ISTSEKERLLFWSGRKAAFPAVGRISPDYLCMDGTIPRAKLPQVLRRMTEMSEHYGLRVANVFHAGDGNLHPLILYDANQ PGEMDKAEAFGADILRLCVEVGGVLTGEHGVGIEKRDLMPEMFSDIDLNQQQRLKCAFDSEGLLNPGKVFPTLHRCAELG RMHVHGGKTAFPDIPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 3e-136 | 57 |
