Gene Information

Name : RPD_0487 (RPD_0487)
Accession : YP_567626.1
Strain : Rhodopseudomonas palustris BisB5
Genome accession: NC_007958
Putative virulence/resistance : Virulence
Product : twin-arginine translocation pathway signal
Function : -
COG functional category : R : General function prediction only
COG ID : COG2041
EC number : -
Position : 561704 - 562483 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence : 
ATGCTGCGTATCAAATCCCTGCTGATCCCCGGCGTCGACAAGACGCTGCTGGTCAAGGACGCCGCCAAACTGATGCCTGA
TCCGACGCGGCGGCGCTTCCTCGCCGGCGGCGCCAGCCTCGGCGCGCTGACGCTGCTGACCGGCTGCGACGTCGTCGACG
GCATGTCGGCGGAGAATCTGCTCGTCAAGGTCTCGAAATTCAACGATGCGGTGCAGGCCGCGATCTTCAATCCGAACACG
CTGGCGCCGACCTACACCGACAAGGACATCACAAGGCCGTTTCCGTTCAACGCGTTCTATACGCTCGACGAAGCGCCCGA
TATCGACGGCAAGGAATGGAAGCTCGACGTCGCGGGGCTGGTCGACAACAAAAAGAGCTGGACGCTCGACGAACTCGGCG
CGCTGCCCGAGGTCAAGCAGATCACCCGCCACATCTGCGTCGAGGGCTGGAGTGCGATCGGCTCGTGGAGCGGCGTGCGG
CTGAGCGATTTCCTCAAGCTGGTCGGCGCCGACACCGGCGCGAAATATGTCTGGTTCCGCTGCGCCGACGACTACACCTC
ACCGATCGACATGCCGACCGCGCTGCACCCGCAGACCCAGATGACCCTCAAATATGACGGCCAGGTGCTGCCGCGCGCCT
ATGGCTATCCGATGAAGATCCGGATCCCGACCAAGCTCGGCTTCAAGAACCCGAAATACGTCGTCGCGATGGAAGTCACC
AACGACTACAAAGGCGGCTATTGGGAAGACCAGGGCTACAATTCGTTCAGCGGCAGCTGA

Protein sequence : 
MLRIKSLLIPGVDKTLLVKDAAKLMPDPTRRRFLAGGASLGALTLLTGCDVVDGMSAENLLVKVSKFNDAVQAAIFNPNT
LAPTYTDKDITRPFPFNAFYTLDEAPDIDGKEWKLDVAGLVDNKKSWTLDELGALPEVKQITRHICVEGWSAIGSWSGVR
LSDFLKLVGADTGAKYVWFRCADDYTSPIDMPTALHPQTQMTLKYDGQVLPRAYGYPMKIRIPTKLGFKNPKYVVAMEVT
NDYKGGYWEDQGYNSFSGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42042.1 hypothetical protein Not tested PAI II 536 Protein 5e-63 55
c3567 NP_755442.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-61 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPD_0487 YP_567626.1 twin-arginine translocation pathway signal VFG1561 Protein 3e-63 55
RPD_0487 YP_567626.1 twin-arginine translocation pathway signal VFG1704 Protein 3e-61 54