Gene Information

Name : Nham_4338 (Nham_4338)
Accession : YP_571765.1
Strain :
Genome accession: NC_007959
Putative virulence/resistance : Virulence
Product : carboxysome structural polypeptide
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 284006 - 284305 bp
Length : 300 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTGAAGCAATGGGTGGTATTGCCCTGGGCATGATTGAAACTCGCGGACTGGTTCCCGCGATCGAGGCGGCGGACGC
GATGACCAAGGCCGCCGAAGTGCGCTTGATCTCGCGTCAATTCGTCGGCGGCGGCTACGTCACCGTGTTGGTGCGCGGCG
AGACCGGCGCGGTCAACGCGGCGGTGCGTGCCGGGGCGGACGCCTGCGAGCGCGTGGGCGACGGCTTGGTGGCCGCGCAC
ATCATCGCGCGGGTGCACAGCGAGGTCGAGGGCATCCTGCCCAAGGCGCCGAGCGCCTGA

Protein sequence : 
MAEAMGGIALGMIETRGLVPAIEAADAMTKAAEVRLISRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARVHSEVEGILPKAPSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-10 56
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-10 52
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-09 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nham_4338 YP_571765.1 carboxysome structural polypeptide VFG1596 Protein 1e-10 56
Nham_4338 YP_571765.1 carboxysome structural polypeptide VFG1597 Protein 1e-10 52
Nham_4338 YP_571765.1 carboxysome structural polypeptide VFG1598 Protein 4e-10 48