Gene Information

Name : Csal_2687 (Csal_2687)
Accession : YP_574733.2
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Unknown
Product : glycolate oxidase subunit GlcD
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 3009901 - 3011400 bp
Length : 1500 bp
Strand : +
Note : -

DNA sequence :
ATGAACATCCTCTTTGACGAACGCCTGGACGGCACGCTGCCGGCGGTCGACAAGGATGCCCTTGTCACGCATCTGACCGC
GCACCTCCCCGACATGACGCTACTGCATCGCGAGGAGGACCTGCGTCCCTTCGAATGCGACGGCCTCTCGGCATATCGCG
TGCTACCCATGCTCGTGGCACTACCCGATACCCTGGAGCAGGTGGAAGCCCTGCTCGGCATCTGTCACACCCAGGGCGTT
CCGGTGGTCACGCGCGGCGCAGGCACCGGCCTCTCCGGTGGCGCCCTGCCCCTCGAAAAGGGAGTGCTACTGGTGATGTC
CCGCTTCAGCCGCATTCTCGACATCGACCCCGAGGCCCGCACCGCACGCGTGCAACCCGGTGTGCGCAACCTGGCGATTT
CCGAGGCGGCTGCGCCCCATGGGCTGTATTACGCACCCGACCCTTCGTCGCAGATCGCCTGCTCGATCGGCGGCAACGTG
GCCGAGAACGCCGGGGGCGTGCACTGCCTCAAGTACGGGCTGACCGTGCACAACGTGCTCGCGGTGAACATCCTGACCAT
CGAAGGGGAGCACATCACGCTCGGCAGCGAGGCCCTGGATACGCCGGGCTTCGATCTGCTGGCGCTGTTCACGGGCTCCG
AAGGCATGCTCGGCGTGATCACCGAAATCACCGTCAAGCTGCTGCCCAAGCCGGAAAGCGCCAAGGTACTGATGGCCAGC
TTCGACGACGTCGAGAAGGCCGGCAAGGCAGTGGGCGACATCATCGCCGCGGGCATCATTCCCGGCGGCCTGGAAATGAT
GGACCGGCTGGCCATTCAAGCCGCCGAGAACTTCGTCAAGGCCGGCTACCCGGTGGAGGCCGAGGCCATCCTGCTGTGCG
AACTGGATGGCGTGGAAGCCGACGTTCACGATGACTGCGAAACGGTTCGCCGAGTGCTCGAGGCCGCCGGCGCGACCGAT
ATTCGGCTGGCCCGTGACGACGCCGAGCGCGCCACCTTCTGGGCCGGACGCAAGAACGCCTTCCCCGCGGTAGGACGCAT
GTCGCCCGACTACTATTGCATGGACGGCACCATTCCCCGGCGCGAGCTGCCGCGCGTCCTCAAGGGCATCGCCGACCTCT
CGGCAACCCATGGCCTGCGCGTGGCCAATGTCTTCCATGCCGGCGACGGCAACATGCACCCGCTGATCCTGTTCGATGCC
AATGCGCCGGGAGAACTGGCACTGGCCGAGGAAGTGGGTGGCAAGATCCTCGAACTCTGCGTCGAGGTCGGCGGCAGCAT
TACCGGCGAGCATGGCGTGGGACGCGAGAAGATCAACCAGATGTGCGCCCAGTTCTCCCCCGACGAGATCACGGTCTTTC
ATGCCGTCAAGGCCGCCTTCGACCCGCTCGGGCTGCTCAATCCCGGCAAGAACATTCCGACGCTGGCACGCTGCGCCGAA
TTCGGTGCCATGCACGTGCATCACGGCAACCTGCCCCACCCCGAGTTGCCGCGTTTCTAA

Protein sequence :
MNILFDERLDGTLPAVDKDALVTHLTAHLPDMTLLHREEDLRPFECDGLSAYRVLPMLVALPDTLEQVEALLGICHTQGV
PVVTRGAGTGLSGGALPLEKGVLLVMSRFSRILDIDPEARTARVQPGVRNLAISEAAAPHGLYYAPDPSSQIACSIGGNV
AENAGGVHCLKYGLTVHNVLAVNILTIEGEHITLGSEALDTPGFDLLALFTGSEGMLGVITEITVKLLPKPESAKVLMAS
FDDVEKAGKAVGDIIAAGIIPGGLEMMDRLAIQAAENFVKAGYPVEAEAILLCELDGVEADVHDDCETVRRVLEAAGATD
IRLARDDAERATFWAGRKNAFPAVGRMSPDYYCMDGTIPRRELPRVLKGIADLSATHGLRVANVFHAGDGNMHPLILFDA
NAPGELALAEEVGGKILELCVEVGGSITGEHGVGREKINQMCAQFSPDEITVFHAVKAAFDPLGLLNPGKNIPTLARCAE
FGAMHVHHGNLPHPELPRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 0.0 77