Gene Information

Name : glcF (Csal_2689)
Accession : YP_574735.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Unknown
Product : glycolate oxidase iron-sulfur subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 3012552 - 3013811 bp
Length : 1260 bp
Strand : +
Note : -

DNA sequence :
ATGCAGACGAATTTTTCCGACGAGGCGCTGCGCCAACCGCACATCCGCGAGGCCGACCGCGTCCTGCGATCGTGCGTGCA
CTGCGGCTTCTGCAACGCCACCTGCCCGACCTATCAACTGCTGGGCGACGAGCGCGACGGCCCGCGCGGGCGCATCTATC
TGATGAAGGAGCTGCTCGAAAGCCGCGACGATGACGACCAGGTCACCCACGAAACGCAAACCCACCTCGACCGCTGCCTG
AGCTGCCGCAACTGCGAGACCACCTGCCCCTCGGGGGTCGAGTATCACAAGCTGCTCGACATCGGGCGCGCCGAGGTGGA
CCGCCGTGTGGGACGCTCTGCCAAGGAGCGAGCCCTGCGCTACGGGCTGCGCAAGGCGCTGGTCGAGCCCCGGCGGTTTC
AAGCGTTGCTCGCCCTGGGCCAGACCTTCCGCCCGCTTGCGCCGACCTCGCTGAAGGCCAAGATCCCGCCCCGCGCGTCC
CGTGCGGGACGTACCGCGCCCACGACGCACAACCGCCGCATGCTCGTGCTCGAAGGCTGCGTGCAACCGGGGTTGTCGCC
GAACACCAATGACGCCGCGACCCGCGTTCTCGACCGGCTGGGCATTGCCCTGAGCTCGGCCCCCGCGGCAGGCTGCTGCG
GCGCCATCGACTATCATCTCAATGCCCAGGAGGCTGGCCGCGAGCGCATGCGGGCCAACATCGACGCCTGGTGGCCATAC
ATCGACCAAGGCGTCGAAGCCATCGTGCAGACTGCCAGCGGCTGCGGGGCGTTCGTCAAGGAATACGGCGACATGCTCGC
GGACGACCCGCGCTACGCCGACAAGGCCAGACACATCAGCGCCCTGGCCAAGGACCTGGTGGAAATCCTGCGGGAAGAAG
ACCTGGAAGCATTGGCGGTTCACGGCGACGCACGACTCGCCTTCCATTGCCCTTGCACGCTGCAGCACGCCCAGAAGCTG
GGCGGCGCGGTGGAAAGCGTGCTCGGCCGGCTGGGCTTCTCGCTGACGACCGTGCGCGACGGCCATCTGTGCTGCGGCTC
GGCGGGTACCTACTCGATCACGCAGCCCGCCTTGGCAACACAATTGCGCGACGACAGACTCGATGCGCTCGAGGCCGGTC
AGCCCGAGCAGATCGTCACTGCCAACATCGGCTGCCAGACTCACCTGAGCGGCGCAGGGCGCACCACCGTCCGGCACTGG
ATCGAAGTCGTCGATGAGGCGCTGACCACGGCACCGAATAACGAGGCGCGGACAGCGTAG

Protein sequence :
MQTNFSDEALRQPHIREADRVLRSCVHCGFCNATCPTYQLLGDERDGPRGRIYLMKELLESRDDDDQVTHETQTHLDRCL
SCRNCETTCPSGVEYHKLLDIGRAEVDRRVGRSAKERALRYGLRKALVEPRRFQALLALGQTFRPLAPTSLKAKIPPRAS
RAGRTAPTTHNRRMLVLEGCVQPGLSPNTNDAATRVLDRLGIALSSAPAAGCCGAIDYHLNAQEAGRERMRANIDAWWPY
IDQGVEAIVQTASGCGAFVKEYGDMLADDPRYADKARHISALAKDLVEILREEDLEALAVHGDARLAFHCPCTLQHAQKL
GGAVESVLGRLGFSLTTVRDGHLCCGSAGTYSITQPALATQLRDDRLDALEAGQPEQIVTANIGCQTHLSGAGRTTVRHW
IEVVDEALTTAPNNEARTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 2e-134 65