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Name : secD (Csal_2835) Accession : YP_574880.1 Strain : Chromohalobacter salexigens DSM 3043 Genome accession: NC_007963 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3163890 - 3165740 bp Length : 1851 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTCAACCGTTATCCCCTGTGGAAGTATCTGCTGATACTCGTCGTACTCCTCGTCGGCCTCATCTACGCGTTACCCAA TCTTTACCCCGCCGACCCCGCCGTTCAGATCAGCAGCACCGCCAGCGGCGCCGCGCTCGACCAAGAGCGTCTCGACCGCC TGACTCAAGCGCTCGAGGACAAGGACATCGCCATCAAGCAAAGCGAGCTGGATGGCAACAGCGCCCTGATTCGTCTCGAA CGGGCCGGCCAGCAGGTCGCCGCCCGCGAGATCATCGACGAACGCCTGGGCGACGCCTACACCGTGGCACTCAACCTGGC CGACGCCACCCCCGGCTGGCTCCAGGCGCTTTCCGCCACGCCCATGAAACTGGGGCTCGACCTGCAGGGCGGGGTGCACT TCCTGCTCGAGGTGGACATGGATGCGGCCGTCGAGCAGCGCCTCGAAGCCAATGCCAGCGCCGTGCGCGACCTGCTTCGC GACGAGCGCATCCGGTATCGCGATACCAGCATCGACGGACGCGCGATCACCTTCCAGTTCGCCAACGCCGACGACCGCAA CGCAGCGCGTGGCTTGATCACCGACCAGTTCCCGGATTTCGAATACAGCACGCCCGACACCGAACGTGGCGCCAGCCTGA CGATGACGTTCACCGATCAGGCCGTGCAGGACCTGCAGGATTATGCCGTCAATCAGAACCTGACCACGATCCGCAACCGT GTCAACGAACTCGGCGTCTCGGAGCCTCTGGTGCAGCGCCAGGGCCCCAGCCGCATCGTCGTCGAGCTACCCGGCGTGCA GGACACCGCCGCCGCCAAGCGCATCGTCGGCGCCACCGCCAATCTGGAATTCCGCCTGGAGGCACGGCCGGACACGCCGG AGCGCGAGATCGAAACGCTCCCCTTCCGCAATGATGAGGGCCGCAGCGCGGACCTGATGCGTGACATCATCGTGACGGGC GACCATGTGTCCAGCGCCAGCCGGAGCTTCGACGAAAACAACCGTCCGCAGGTCAACATCAACCTCGACGGTACCGGCGG CTCGATGATGAGTCGTGCCACGCGCGCCAATATCGGGCGCAACATGGCGGTCGTCTTCATCGAGCACAAGACCCGCACCC GCACGGTCATGGAAGACGGCGAGGAAGTCGAAAAGCGCGAGGCCTATACCGAGCGCGGCATCATCAGCCTGGCCACCATC CAGAGCACGCTGGGCAACCGTTTCCGCATCACCGGACTCGAATCCGCCAGCGAGGCCGGTGACCTGGCCCTGCTGCTGCG CTCCGGGTCTCTCGCGGCACCGATCTACTTCGCCCAGGAGCGCACCATCGGCCCGAGCCTGGGGGCGCAGAACATCGCCC AGGGCATCATGTCGGTGGAAGTCGGCCTGCTGCTCGTGGTGCTGTTCATGCTGGCGCGCTACAAGGCCTTCGGTGTGGTC GCCAACGTCTCGCTGGGTCTGAACCTGGTACTGCTGGTCGCCGCCATGTCATTGCTCGGCGCCACGCTGACCCTGCCCGG CATCGCCGGCATCGTCCTGACCCTGGGCATGGCGGTGGATGCCAACGTCCTGATATTCGAGCGAATACGCGAGGAGCTGC GCGCCAAGATGCCGGTGCAACAGGCCATTCATACCGGCTTCGAGCGTGCCTTCACCTCGATCGTCGATGCGAACATCACC ACCTTGCTGGTCGCGGTCATCCTGTTCTCGATCGGCACCGGCCCGGTCAAGGGCTTCGCCGTAACGCTGTCGCTGGGCAT CCTGACGTCGATGTTCACCGCCATCATGGTGTCGCGCGCCATGATCAACCTCACCATCGGCGGGCGCCCGCTGAAGAAAA TCTGGATCTGA Protein sequence : MLNRYPLWKYLLILVVLLVGLIYALPNLYPADPAVQISSTASGAALDQERLDRLTQALEDKDIAIKQSELDGNSALIRLE RAGQQVAAREIIDERLGDAYTVALNLADATPGWLQALSATPMKLGLDLQGGVHFLLEVDMDAAVEQRLEANASAVRDLLR DERIRYRDTSIDGRAITFQFANADDRNAARGLITDQFPDFEYSTPDTERGASLTMTFTDQAVQDLQDYAVNQNLTTIRNR VNELGVSEPLVQRQGPSRIVVELPGVQDTAAAKRIVGATANLEFRLEARPDTPEREIETLPFRNDEGRSADLMRDIIVTG DHVSSASRSFDENNRPQVNINLDGTGGSMMSRATRANIGRNMAVVFIEHKTRTRTVMEDGEEVEKREAYTERGIISLATI QSTLGNRFRITGLESASEAGDLALLLRSGSLAAPIYFAQERTIGPSLGAQNIAQGIMSVEVGLLLVVLFMLARYKAFGVV ANVSLGLNLVLLVAAMSLLGATLTLPGIAGIVLTLGMAVDANVLIFERIREELRAKMPVQQAIHTGFERAFTSIVDANIT TLLVAVILFSIGTGPVKGFAVTLSLGILTSMFTAIMVSRAMINLTIGGRPLKKIWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-162 | 58 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-162 | 58 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-162 | 58 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-162 | 58 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-162 | 58 |
