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Name : Nham_1439 (Nham_1439) Accession : YP_576721.1 Strain : Nitrobacter hamburgensis X14 Genome accession: NC_007964 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1621769 - 1623751 bp Length : 1983 bp Strand : + Note : - DNA sequence : ATGATTGCCGAGGTCGGACATTATGCGCTGGTGCTGGCGCTTGGTCTTGCGTTGATCCAGTCCACGGTGCCGATCATCGG CGCGAGACTGCACGACGGCGCGCTGATGAACGTGGCGCGCTCGACCGCGCTTGCGCAATTGCTGTTCGTCGGCGTTTCGT TCCTCGCGCTGGTGACGCTGCACGTCATTTCCGACTTCTCGGTCGTCAACGTGTTCGAGAATTCCCATTCGCTGAAGCCG ATGCTCTACAAGATCACCGGCGTCTGGGGCAATCACGAAGGCTCCATGCTGTTGTGGGTGACGATCCTCGCGCTGTTCGG CGGGCTGGTCGCCGCGTTCGGCAGTAACCTTCCGCTGTCGCTGCGCGCCCATGTGCTGGCGGTGCAGGGCTGGATCGCGA CCGCGTTCTATCTGTTCATCCTGCTGACGTCGAATCCGTTCATGCGGCTCGTCAGCCCGCCGCTGGAAGGCCGCGACCTC AATCCGGTGCTGCAGGATATCGGGCTCGCGGTGCATCCGCCGATGCTCTATCTCGGCTATGTCGGATTCTCGATCTCGTT CTCCTTCGCCGTCGCCGCTCTAATCGAAGGCCGCATCGATGCCGCCTGGGCGCGCTGGGTGCGGCCGTGGACGCTGATGG CGTGGATTTTCCTGACGCTTGGAATCGCGATGGGGTCGTACTGGGCCTATTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGATCCGGTCGAGAACGCATCGCTGATGCCGTGGCTGGCCGGAACGGCGCTGCTGCATTCCTCGGTGGTGATGGAAAA GCGCAACGCGTTGCGGGTATGGACCATCCTGCTTGCGATCCTGACCTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTGC GCTCAGGCGTGCTGACATCGGTCCATGCCTTCGCCACCGATCCGACGCGCGGCGTCTTCATTCTGCTGATCCTGTGCACC TTCATCGGTGGCAGCCTGTCCTTGTATATCTGGCGTGCCTCCGCTCTGAAGCAGGGCGGGTTGTTCGCGCCGATCTCGCG CGAGGGCGCGCTCGTGCTCAACAACCTGTTCCTGACCACGGCCTGCGCCACCGTCTTCATCGGGACGCTGTATCCGCTGG CGCTCGAGGTCATCACCGGCACAAGGATTTCGGTCGGCGCGCCGTTCTTCAACCTGACATTCGCTCCCTTGTTCGTCCCG CTGCTGATCGCGGTGCCGTTCGGCCCGCTGCTGGCGTGGAAGCGCGGCGATCTGGCCGGCGCCTCGCAACGGTTGATGGC CGCCGGGATCGGCGGCATCATCGCGGTGGCCGTGCTGTGGGCATGGACGCGCGGCGGCAGCACCTTCGCGCCGCTGGCGA TCGGACTCGCCGTGTTCGTGATTCTCGGCGCGCTGAGCGATCTCGCCGGGCGCATCAACCTGTTTCATGCGTCGCTTCCG GTGTCGTTCCGCCGCGCTAAGGGGCTGCCGCGTTCGGCCTGGGGCACCGTTTTCGCCCATGCCGGCCTCGGCGTGGCCCT GATCGGCATCGTCTGCGAAACCACCTGGAACACAGAATACATCGCCTCCATGAAGCAGAACGACGTGGCGCAGGTCGGCG GTTACAGCCTGACCTTCGACGGCACGACGCAGCGGGAGCGATCCAACTTCCGGGAACAGATTGCACGCTTCACCGTGAGC AAGGACGGGCAGCCGATCGCGGTGATGACGCCGTCGAAGCGCAACTTCACCACGCGCGCGGCATCGACCACGGAAGCCGC GCTGCTGACGCGAGGTGCGAGCCAGCTCTATATCTCGCTCGGCGATACCGCCGCCGATGGGGCGGTCGCGGTGCGCATCT ACCACAAGCCGATGGTGCTGTTGATCTGGTTCGGGCCGGTTCTGATGGCCTTTGGCGGCGTGCTGTCGCTGTCCGACCGT CGTCTGCGGGTTGGCGCGCCGAAACCGGCGAAGGCCAGCCACATACTCCAGCCGGCGGAGTGA Protein sequence : MIAEVGHYALVLALGLALIQSTVPIIGARLHDGALMNVARSTALAQLLFVGVSFLALVTLHVISDFSVVNVFENSHSLKP MLYKITGVWGNHEGSMLLWVTILALFGGLVAAFGSNLPLSLRAHVLAVQGWIATAFYLFILLTSNPFMRLVSPPLEGRDL NPVLQDIGLAVHPPMLYLGYVGFSISFSFAVAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGTALLHSSVVMEKRNALRVWTILLAILTFSLSLLGTFLVRSGVLTSVHAFATDPTRGVFILLILCT FIGGSLSLYIWRASALKQGGLFAPISREGALVLNNLFLTTACATVFIGTLYPLALEVITGTRISVGAPFFNLTFAPLFVP LLIAVPFGPLLAWKRGDLAGASQRLMAAGIGGIIAVAVLWAWTRGGSTFAPLAIGLAVFVILGALSDLAGRINLFHASLP VSFRRAKGLPRSAWGTVFAHAGLGVALIGIVCETTWNTEYIASMKQNDVAQVGGYSLTFDGTTQRERSNFREQIARFTVS KDGQPIAVMTPSKRNFTTRAASTTEAALLTRGASQLYISLGDTAADGAVAVRIYHKPMVLLIWFGPVLMAFGGVLSLSDR RLRVGAPKPAKASHILQPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-110 | 45 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-91 | 45 |
