Gene Information

Name : Nham_3565 (Nham_3565)
Accession : YP_578754.1
Strain : Nitrobacter hamburgensis X14
Genome accession: NC_007964
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 3923332 - 3925515 bp
Length : 2184 bp
Strand : +
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACTCGCATTGACGCCCACGGACTGAAGATCGCGCCTGTCCTGTTCGATTTTATCGCCCGGGAGGCCACGCCCCGGAC
CGGCATTGCCCCGGATGCCTTTTGGGCCGGGCTTGCCGCCATCGTCCGCGATCTCGGACCGAGAAACCGCGAATTGCTCG
CGGTGCGCGATACGCTGCAAGCGCAGATCGACGGCTGGCATCGCGCCAACAAAAGCCGGCCGTTCGACATGGCCGCCTAC
ACGGCGTTCCTGAAAGAGATCGGCTATCTGCTGCCAGAGCCCGCGACCCATGCGGTCGAGACCGCCAATATCGACGACGA
GATCGGAAAAATCTGCGGACCGCAACTGGTGGTGCCGCTGACCAATGCCCGTTACGCGCTGAATGCCGCCAATGCGCGCT
GGGGCAGCCTCTACGATGCGTTATACGGCACCGATGCCATTGCGCACGAGGCCAACGAGGCCAGGGGCTATGACAAGGCG
CGCGGCGACAAGGTGATCGCCAAAGCCAAGGCGTTCCTCGATTCCGCCGCACCGCTTTCGGCCGGCAGCCATGCCGATGT
CGCCGGCTACAGCGTCGTCAATGGACACCTGTCGGCGAAACTCAGGAGCGGCGACGCCACCGGCCTGAAGACGATTGCGC
AATTCGCGGGCTATCAGGGCGCCGCGGACGCACCGTCCGCGATCCTGCTGGTCAACCACGGCCTGCATATCGACATCCGG
ATCGACCGCGCCGACCGCATCGGCAAGGACGATCCGGCCGGCGTCGCCGATGTGATCATCGAGGCCGCCATCAGCACCAT
TCTCGATATGGAGGACAGCGTCGCCGCCGTCGATGCCGACGACAAGGTGCTGGTGTATCGCAATACGCTCGGCCTGATGA
ACGGCACGCTCACGGACACCTTCGAGAAGGGCGGCAAGACCGTCACCCGCGCCCTCAACGCCGATCGCATCTACACGTCA
GCCAATGGCAAGGAGATCGCCCTCCACGGACGCAGCCTGCTTTTGATGCGCAACGTCGGCCATCACATGGTTACCGACGC
GGTACTGGATGAAAACGGCGCAGAGATTCCGGAAGGTATGCTCGACGCCGCGGTATCAAGCCTGCTCGCGATCCACGATC
TCATGGGGATTTCGAAGACGCGGAACAGCCGGACAGGCTCGGTCTACATCGTCAAGCCGAAGATGCACGGCCCCGACGAG
GTGGCGCTGACCTGCGAACTGTTCGCCCGCGTCGAGACCATGCTCGGACTGCCGGAGAACACCCTCAAGATCGGCATCAT
GGACGAGGAGCGCCGCACCACCGTCAACCTCAAGACCTGCATCCAGAACGCCTCGAAACGAGTCTGCTTCATCAACACCG
GCTTCCTCGACCGCACCGGCGACGAAATCCATACCTCGATGGAAGCGGGTCCGATGATCCGCAAGAACGAGATGAAGGCG
CAGCCGTGGATGAGGGCCTACGAGGACTGGAATGTCGACATCGGCCTGATCGACGGCCTGCCCGGCCACGCCCAGATCGG
CAAGGGCATGTGGGCCGCGCCCGACCGGATGGCCGACATGCTCGCGCAGAAGGTCGACCACCCGCAAGCCGGCGCCACCA
CCGCATGGGTGCCCTCGCCGACCGCGGCAACGCTGCACGCCCTGCACTATCATCAGGTCGACGTGCTGAAGCAGCAACAG
GAATTGAAAGCCGGCGGACAGCGCGCAAAGCTGTCGGACATCCTCACGGTCCCGGTGTCGCAATCGAACTGGGCGCCGGA
CGATGTGAGGCTGGAGATCGACAACAACTGCCAGGGCATTCTCGGCTACGTGGTGCGCTGGATCGATCAGGGCGTCGGCT
GCTCGAAGGTGCCCGATATCCACGACGTCGGCCTGATGGAAGACCGCGCCACGCTGCGCATCTCCAGCCAGCATCTGGCG
AACTGGCTACATCAGAACGTCGTCACCAGCGATCAGGTGATGGACTCGCTGAAGCGCATGGCCGTCGTCGTTGACAAGCA
GAACGCCGGCGATCCCCTCTACACGCCGATGGCGCCGACATTCGACGGCGTCGCCTTCAAGGCGGCCTGCGATCTCGTGT
TCAAGGGCCGCGAGCAGCCGAACGGCTATACCGAATACATCCTGACCGAACGGCGGCGCCAGGCCAAGGCGGAGTCCAAG
GGGGAGTCCGAGGCGGCCGGCTGA

Protein sequence :
MTRIDAHGLKIAPVLFDFIAREATPRTGIAPDAFWAGLAAIVRDLGPRNRELLAVRDTLQAQIDGWHRANKSRPFDMAAY
TAFLKEIGYLLPEPATHAVETANIDDEIGKICGPQLVVPLTNARYALNAANARWGSLYDALYGTDAIAHEANEARGYDKA
RGDKVIAKAKAFLDSAAPLSAGSHADVAGYSVVNGHLSAKLRSGDATGLKTIAQFAGYQGAADAPSAILLVNHGLHIDIR
IDRADRIGKDDPAGVADVIIEAAISTILDMEDSVAAVDADDKVLVYRNTLGLMNGTLTDTFEKGGKTVTRALNADRIYTS
ANGKEIALHGRSLLLMRNVGHHMVTDAVLDENGAEIPEGMLDAAVSSLLAIHDLMGISKTRNSRTGSVYIVKPKMHGPDE
VALTCELFARVETMLGLPENTLKIGIMDEERRTTVNLKTCIQNASKRVCFINTGFLDRTGDEIHTSMEAGPMIRKNEMKA
QPWMRAYEDWNVDIGLIDGLPGHAQIGKGMWAAPDRMADMLAQKVDHPQAGATTAWVPSPTAATLHALHYHQVDVLKQQQ
ELKAGGQRAKLSDILTVPVSQSNWAPDDVRLEIDNNCQGILGYVVRWIDQGVGCSKVPDIHDVGLMEDRATLRISSQHLA
NWLHQNVVTSDQVMDSLKRMAVVVDKQNAGDPLYTPMAPTFDGVAFKAACDLVFKGREQPNGYTEYILTERRRQAKAESK
GESEAAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 60