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Name : ccmF (Rmet_2390) Accession : YP_584536.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : heme lyase, CcmF subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2600281 - 2602242 bp Length : 1962 bp Strand : + Note : - DNA sequence : ATGATTCCAGAAATCGGCCACCTCGCCCTCATCGCTGCCTTGTTCGTGGCACTCGCTCAAGGTGTTCTTGCCCTGGCCGG CGCGGCGCGAGCCAACCTCACCTGGATCGCGTTCGCCCGCCCCGCTGCACGCGCTCAATTCCTGTTGGTGATGGTCGGTT TTGCCGCGCTCACCTGGGCCTTTGTCGCGAAGGACTACTCGGTCGCCTACGTCGCTCAAAACTCCAATTCTCAGCTCCCG CTGGGCTACAGAATGGCCGCGGTCTGGGGCGGACATGAGGGTTCGCTCCTGCTCTGGCTGCTGATGCAGACCGGCTGGGC CTATGCGGTCAGCCGGTTGTCGAAACAGCTTCCGGATGCCATGGTGGCGCGCGTTCTGGGCGTGCTCGGCCTGGTGACGG CCGGCTTCCTGCTGTTCGTCCTGTTGACCTCCAATCCCTTCGAGCGACTTTTCCCGGTACCGCAAGATGGATGGGATCTG AATCCGCTCCTGCAGGATATCGGCTTGATCTTTCATCCACCGCTGCTTTACATGGGGTACGTCGGATTTTCGGTGGCCTT CGCATTCGCGATTGCTGCATTGCTTGCCGGACAACTGGACTCGACGTGGGCACGCTGGTCTCGTCCCTGGGCCACCGCAG CCTGGGCAAATCTGACGGTCGGAATCGCCTTGGGGAGTTGGTGGGCCTACTACGAGTTGGGCTGGGGGGGCTGGTGGTTT TGGGACCCGGTCGAGAACTCGTCGTTCATCCCCTGGCTGGTGGGCACCGCCTTGATCCACTCTTTGGCGGTGACGGAAAA GCGGGCCAGTTTCAAGAACTGGACGGTGCTGCTCTCGATCGGCGCATTTTCTTGCTCGCTTTTGGGTGCCTTTCTGGTGC GCTCGGGCGTACTGACTTCTGTGCATGCATTTGCCACCGATCCGCGACGCGGGTTATTCATTCTGATTCTGCTGACGGTC ATTGTGGGCACGTCGCTCGCTTTGTTCGCATGGCGAGCCCCTAAGGTCGGCATGGGAGGACGGTTCGACATGGTCTCCAG GGAGTCCTTGCTGCTGGTCAACAATGTGCTGTTGGTCGTCACTGCCGGCGCTGTCGCGCTCGGTACGCTGTACCCACTGC TCGTCGATGCGCTGGGCCTGGGCAAGCTCTCCGTGGGGCCGCCATACTTCAATGCGGTGTTCGTGCCATTGATGATCCCC GCGTTGCTTCTGATTGCGGTAGGACCCGCCGCCAATTGGAAGGCCGCCCAGTTCGGTGCCATCTTCAGGCAGTTGCGCGT GCCGATGATTGCTGCACCCCTGGTGGGCCTGACCGCCCCGTTCGTGCTGGGGCACTGGTCAGCTTCTGCGGCGTTGGGCT TGATGCTCGCCACGTGGATTGCGGTGTCGGTGGTGACGGGCATCTTCGGCCGAATGCGCGCCACCCGCGGCGGGTTGCGT GCCCAGCCACGCAGTTGGCTTGGGATGCATATGGCGCATCTGGGCATCGCGGTATTCGTGACTGGCGTGACCATCGTCAG TGGGTATGAGACCGAGCGAGACGTTCGATTGGCCCAGGGCGAGTCCGTCAGCATCGGCGGCTACGACCTCACTTTGATCG GCGTCAGAAGCACGCGGGGGCCCAACTACGTGGCGCAGATAGGCGATATCGAACTGTCGCGCGACGGCAAGGTCTTGCGT CGGCTGCATCCGGAAAAGCGCAATTACCCGGCCTCGCAGATGCCGATGACCGAGGTGGCGATCGATGCAAACGGACTGCG CCACGTCTACGCGGCGCTCGGCGAACCGCTCGGCGACGGTGTTTGGAGCGTTCGTGTCTACCACAAGCCATTCGTTGACT GGATCTGGATCGGCTGCATCCTGATGGCGCTTGGCGGTGGCTTGGCCATCAGCGATCGTCGATACCGTCTGAAGCCTCGC CGTCAACACGTCGCTCCGCCATTGCCCGAGGCCGCATCATGA Protein sequence : MIPEIGHLALIAALFVALAQGVLALAGAARANLTWIAFARPAARAQFLLVMVGFAALTWAFVAKDYSVAYVAQNSNSQLP LGYRMAAVWGGHEGSLLLWLLMQTGWAYAVSRLSKQLPDAMVARVLGVLGLVTAGFLLFVLLTSNPFERLFPVPQDGWDL NPLLQDIGLIFHPPLLYMGYVGFSVAFAFAIAALLAGQLDSTWARWSRPWATAAWANLTVGIALGSWWAYYELGWGGWWF WDPVENSSFIPWLVGTALIHSLAVTEKRASFKNWTVLLSIGAFSCSLLGAFLVRSGVLTSVHAFATDPRRGLFILILLTV IVGTSLALFAWRAPKVGMGGRFDMVSRESLLLVNNVLLVVTAGAVALGTLYPLLVDALGLGKLSVGPPYFNAVFVPLMIP ALLLIAVGPAANWKAAQFGAIFRQLRVPMIAAPLVGLTAPFVLGHWSASAALGLMLATWIAVSVVTGIFGRMRATRGGLR AQPRSWLGMHMAHLGIAVFVTGVTIVSGYETERDVRLAQGESVSIGGYDLTLIGVRSTRGPNYVAQIGDIELSRDGKVLR RLHPEKRNYPASQMPMTEVAIDANGLRHVYAALGEPLGDGVWSVRVYHKPFVDWIWIGCILMALGGGLAISDRRYRLKPR RQHVAPPLPEAAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 0.0 | 100 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-125 | 56 |
