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Name : secD (Rmet_2946) Accession : YP_585088.3 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : SecYEG protein translocase auxiliary subunit Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3202006 - 3203916 bp Length : 1911 bp Strand : + Note : - DNA sequence : ATGCGCGCGATTATCGACCACGCCAACCGCAATGACTGGCCAACGATGAATCGTTATCCGATTTGGAAATACATCGTGAT TCTGGTGGCTCTGGCCATCGGCATCACCTACACCATGCCGAACTTCTTCGGCGAGGCGCCCGCCGTCCAGGTATCGTCGG CCAAGGCCACGGTCAAGGTCGACCTGTCCATGCAGAAGCATGTCGAGGAGATCCTGGCGCAGAACCAGCTGCAGCCTGAC GGGGTGTTCTTCGACGTGTCCGGCCAGTCCGGCTCGGTCAAGGCGCGCTTCCGCACCACTGACGAGCAGCTCAAGGCCAA GGACGTGCTGTCGCGCTCGCTGAACCCCGACGCGAACGATGCGACCTATGTCGTGGCGCTGAACCTGCTGTCCGGTTCGC CGCGCTGGCTGACCGCGCTGCACGCGCTGCCCATGTACCTGGGTCTGGATCTGCGCGGTGGCGTGCACTTCCTGCTACAG GTGGACATGAAGGGCGCCGTCGACAAGAAGCTCGACAGCCTGGCCGGCGATGCGCGCACGCTGCTGCGCGACAAGAACAT CCGCCACGGCGGCATTGACCGTGACGGCGAGCGTCTGACCGTGCGCTTCAGCAATGGCGACGACGCGGAACGCGCGCGCG GCATCCTGGCCGACAACCTGCGCGAGCTGGCCTTCACGATGGACGGCACGAACATCGTCGGCACGTTCACGGAAGCCGCC CGCAAGACCGTGCAGGACGGCGCCGTCAAGCAGAACATCACCACCCTGCACAATCGTGTGAACGAACTTGGCGTGGCAGA GCCGGTGATCCAGCAGCAAGGCTCCGACCGCATTGTGGTGCAGCTGCCGGGCGTGCAGGACACCGCCAAGGCCAAGGACA TCATCGGCCGTACCGCCACGCTCGAGGCGCGCCTGGCCGATCCGGATGTGCGCAACCCGCGCCCGGGTGACCCCGTGCCG TTCGGCGACGAGCTGTTCACGCAAGGCAACAGCGCCCCGGTGCTGCTGCGCAAGCAGGTGATCTTCACCGGCGACCGTAT CGAAAGCGCCTCGGCCGGTTTCGACCAGAACCAGCGCCCGTCCGTCAACATCAAGCTCGACGCCCAAGGCGGCCGCATGC TGCGTGACGTGTCGCGGGAGAACATTGGCAAGCCGATGGGCATCGTCCTGTTCGAGAAGGGCAAGGGCGAAGTGCTGACT GTGGCGACGATCCAGTCCGAGCTTGGCTCGAGCTTCCAGATCACCGGTTCTTACTCGACCGAAGCCGCCAACGACCTGGC CCTGCTGCTGCGCGCCGGCTCGCTGGCCGCCCCGATGGAAATCATCGAGGAACGCACAATCGGCCCGTCGCTGGGCGCGG ACAACATCCAGAAGGGCTTTGACTCGGTGGCCTACGGCTTCGCCGCGATCGCCGTCTTCATGGTGCTGTACTACATGCTG TTCGGCGTGTTCTCCGTGATCGCGCTGGGCGTGAACCTGCTGCTGCTGGTGGCGGTGCTGTCGATGCTGCAGGCCACGCT GACGCTGCCTGGCATCGCCGCTATCGCGCTGGTGCTCGGCATGGCCATCGACGCGAACGTGCTGATCAACGAGCGGATCC GCGAGGAACTGCGCGCGGGCGCATCGCCGCAGATGTCGATCGCCATCGGCTTCGAGCGTGCCTGGGCCACGATTCTCGAC TCGAACGTGACCACGCTGATCGCTGGCCTGGCGCTGCTGGCCTTTGGCTCGGGCCCGGTGCGCGGCTTTGCCGTGGTGCA CTGCCTGGGCATTCTGACCTCGATGTTCTCGGCGGTGTTCTTCAACCGCGGCCTGGTCAACCTTTGGTACGGCCGCAAGA AGAAGCTCCAGGGCTTGGCCATCGGTCAGATCTGGAAGCCGGACACCACCGACACCCCGGTCGCCAAGTAA Protein sequence : MRAIIDHANRNDWPTMNRYPIWKYIVILVALAIGITYTMPNFFGEAPAVQVSSAKATVKVDLSMQKHVEEILAQNQLQPD GVFFDVSGQSGSVKARFRTTDEQLKAKDVLSRSLNPDANDATYVVALNLLSGSPRWLTALHALPMYLGLDLRGGVHFLLQ VDMKGAVDKKLDSLAGDARTLLRDKNIRHGGIDRDGERLTVRFSNGDDAERARGILADNLRELAFTMDGTNIVGTFTEAA RKTVQDGAVKQNITTLHNRVNELGVAEPVIQQQGSDRIVVQLPGVQDTAKAKDIIGRTATLEARLADPDVRNPRPGDPVP FGDELFTQGNSAPVLLRKQVIFTGDRIESASAGFDQNQRPSVNIKLDAQGGRMLRDVSRENIGKPMGIVLFEKGKGEVLT VATIQSELGSSFQITGSYSTEAANDLALLLRAGSLAAPMEIIEERTIGPSLGADNIQKGFDSVAYGFAAIAVFMVLYYML FGVFSVIALGVNLLLLVAVLSMLQATLTLPGIAAIALVLGMAIDANVLINERIREELRAGASPQMSIAIGFERAWATILD SNVTTLIAGLALLAFGSGPVRGFAVVHCLGILTSMFSAVFFNRGLVNLWYGRKKKLQGLAIGQIWKPDTTDTPVAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 7e-101 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 7e-101 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 7e-101 | 42 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-101 | 42 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-101 | 42 |
