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Name : clpB (Rmet_0618) Accession : YP_582773.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Virulence Product : Chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 677318 - 679999 bp Length : 2682 bp Strand : - Note : - DNA sequence : ATGACCACCCGCGATTACTCTCCCTTTCTGCGACGCCTGAACGACCACTGCGCCCGTGCTCTGGCGGATGCAGCCAGTCT TTGCGAAACCCGCGCGCACCGTGACATCGAGGTGGAGCACTGGCTGATCAAACTGATGGAACAGGGTGACGGCGACCTGC TTGCCATCCTGCGTCGCTACGAGCTGGATGTCGATGGGATCTGGAACGGACTGCTGGCTGCGGTCGACCACCTGCCGCAT GACCTCCGGGGCAGGCCGGGGCTATCGCAGCGCCTGGGCCAGTGGCTGGAGGCAGCGTGGATGCGCGCCTCGCTCGAATC CACGGCCCCGGGCGTAGACAGATCGATTCGTTCGGCCCACTTGCTGGCGGCACTGGCGGAGACGCCGCACCTGTTGCGCG CCCCGGATGCCTGGCCGCTGCTGAGCGTGTCTGCCGCGCAGATTGAGCGGCTGATGCCTGAACTGGACGAGATATCTGTC GAGGCAACATCGCCGATCACGCCTAGCCAGGGACCGGCGACCATCGCTACAAGGCGCCCTGCCGGCCAGCCCGACAACTC TGCCCTCTCTCGTTTCACCACGGACGTCACGCAAAAGGCGCGCGATGGCAAGATCGACCCTGTGTTTGGCCGCGACGTCG AGATCCGGCAGATGGTCGATATCCTCGCCCGGCGCCGTAAGAACAATCCGATTCTGGTCGGCGAACCGGGGGTCGGCAAA ACTGCGCTCGTCGAAGGGCTGGCGCTCAAGATCGCCGAAGAGGATGTGCCCACGGCCATCCGGGACGTGACCGTACTCAC CTTGGATATGGGCCTCCTGCAAGCCGGTGCGGGCGTCAAGGGCGAGTTCGAGCAGCGCCTCAAGAATGTCATTGAAGCCG TCCAGCAGTCGCCGACGCCCATCCTGCTCTTCATCGACGAGGCGCACACCCTGATTGGCGCCGGCAACACGGCCGGTGGC GCCGATGCCGCCAACCTGCTCAAGCCTGCACTGGCACGGGGCGAACTACGCACGATCGCGGCAACCACCTGGTCCGAATA CAAGCAGTACTTCGAGCGCGACGCGGCGCTGGAGCGCCGCTTCCAGATGGTCAAGGTCGATGAGCCCGATGATGAGAACG CCTGCCTGATGTTGCGCGGGCTCAAGGATCGGTATGCACAGCACCACAACGTCCACATCACCGATGCCGCCGTCGCAGCC GCCGTCCGTCTTTCACGTCGCTATCTGACTGGGCGCCAACTGCCCGACAAGGCTGTCGACCTGATCGACACGGCGGCTGC GCGGGTGCGCATGAGTCAGGAGGCCAGGCCCGTGGCGATCTGCACCCTTGAAGCCGAACGCGCGGCGCTGGGGGTCGAGT ACTTGGCGCTGCAGCAGGATCAGGGTGCCACCGGCGAGGACAAGCGCAATCGTCTGTCGGCGATCGAGACGCGCCTACGC GAACTTGCCATCGAACTCGGACAGCTTGAGTTCGAATTAGCGGCGCAGAAGGACGCTGCCGACAAGCTGATGGTGCTGCG TGCCCAATGGCAGGCCGCTACCGACGCTTCCGAGCGCCACGATCTCGCGTCCTCCATTCAGGCTGCCCACCAGGTCCTGG CCGCGCACGGTCAGGCGACACTTCTACATGCAGAAGTTGCTGAGACCGTCGTGGCGCAGGTAATTGCCGACTGGACCGGC GTGCCGGTTGACAACCTGTTGTCGAATGAACTGGCCACCCTGCTGGAGCTGGAGGCACGCCTCGGACGGGTCGTGGTCGG GCAGGACGAGGCGCTGGCCGCGCTCGGCAAAAGCCTGCGCGCCTCCAAGGCGGGCTTGAAATCCGAGGAGGCACCGCTGG GCGTCTTTCTCCTCGTGGGCCCTTCCGGGGTCGGCAAGACCGAAACGGCACGGGCACTGGCCGATCTCATGTTCGGCGGT GAACGCTCGCTCATCACGATCAACCTGTCGGAGTATCAGGAAGCCCACACCGTATCGCAATTGAAGGGATCGCCGCCGGG CTATGTCGGCTATGGCGAGGGCGGCATCCTGACTGAGGCTGTCCGTCAGCGCCCCTACAGCGTGGTCCTCCTGGATGAGG TGGAAAAGGCCCATCGGGACGTGCTCAACCTGTTCTACCAGGTCTTCGATCGCGGCTTCATGCGCGATGGCGAAGGCCGG GTCATTGATTTCCGCAACACCGTCATCCTGATGACATCGAATCTCGGCAGCGAGCAAATCCTGGCGGCCACCGACGCCAC AACGGAAGCTGGTGTGGAAATCCCCGCCAGCGCGCTGATGGAGACCATCCGGCCGCTCCTGATCGACCGCTTCCAACCCG CGCTGCTGGCGCGCTTCCAGACCATTGTGTACCGGCCGCTCGCCGCGGAGGCCATGGCCACGATCGTAGGGATGAAGCTG GCCAAGGTGGCCGAGCGCATCGAACGCCGGTTCGACGTGCCGCTGCGCTGCGACGACGCCCTGGTGGCCGAACTGGTGCG CGCCTGCCTGCTGCCTGACTCTGGCGCACGCAATATCGACAGCCTGCTCGACCAGCAGATCTTGCCCGTGCTGTCGCGTG AATTGCTGATACGCATGGCCAACAGGCAGGTACCTGCGTCTATCCGGCTCTCGTTCTCCGAGGAGGACGGCATTGGGCTG GACTTCGATGATGCGGCAACCACCGCGGAGGAATACGCGTGA Protein sequence : MTTRDYSPFLRRLNDHCARALADAASLCETRAHRDIEVEHWLIKLMEQGDGDLLAILRRYELDVDGIWNGLLAAVDHLPH DLRGRPGLSQRLGQWLEAAWMRASLESTAPGVDRSIRSAHLLAALAETPHLLRAPDAWPLLSVSAAQIERLMPELDEISV EATSPITPSQGPATIATRRPAGQPDNSALSRFTTDVTQKARDGKIDPVFGRDVEIRQMVDILARRRKNNPILVGEPGVGK TALVEGLALKIAEEDVPTAIRDVTVLTLDMGLLQAGAGVKGEFEQRLKNVIEAVQQSPTPILLFIDEAHTLIGAGNTAGG ADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDENACLMLRGLKDRYAQHHNVHITDAAVAA AVRLSRRYLTGRQLPDKAVDLIDTAAARVRMSQEARPVAICTLEAERAALGVEYLALQQDQGATGEDKRNRLSAIETRLR ELAIELGQLEFELAAQKDAADKLMVLRAQWQAATDASERHDLASSIQAAHQVLAAHGQATLLHAEVAETVVAQVIADWTG VPVDNLLSNELATLLELEARLGRVVVGQDEALAALGKSLRASKAGLKSEEAPLGVFLLVGPSGVGKTETARALADLMFGG ERSLITINLSEYQEAHTVSQLKGSPPGYVGYGEGGILTEAVRQRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGR VIDFRNTVILMTSNLGSEQILAATDATTEAGVEIPASALMETIRPLLIDRFQPALLARFQTIVYRPLAAEAMATIVGMKL AKVAERIERRFDVPLRCDDALVAELVRACLLPDSGARNIDSLLDQQILPVLSRELLIRMANRQVPASIRLSFSEEDGIGL DFDDAATTAEEYA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-140 | 44 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-107 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_582773.1 | Chaperone ClpB | VFG2076 | Protein | 4e-156 | 45 |
| clpB | YP_582773.1 | Chaperone ClpB | VFG2084 | Protein | 4e-141 | 44 |
| clpB | YP_582773.1 | Chaperone ClpB | VFG0079 | Protein | 1e-113 | 43 |
