Gene Information

Name : rpoJ (Rmet_4499)
Accession : YP_586633.1
Strain :
Genome accession: NC_007974
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma J factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1100615 - 1101115 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence : 
ATGGATCCAGGTACCCGTTCGCAGGTCGATGTCCTTTACAGCCGGCATCACGCATGGCTGCAAGGCTGGCTGTTGCGAAA
GATCGGCAATGCATGCGATGCGGCGGACATCGCCCAGGATGTATTCGTCAGGGTGCTTCACAGGAAAGTCGTCGAGATCC
GTGAGCCGCGCACCTACCTGGGCACCATTGCCAATGGGCTGGTCATCGATTTCTGGCGGCGGCGGGAACTTGAGCAAGCA
TGGCTGGAGACGCTGGCTCAATTGCCGGAAGCACATACGCCATCGCCCGAAAGCCGTCTGCACTTCCTGCAGACGTTGAT
CGAGATCGATCAGATGCTCGATACGCTGAAGCCGAACGCGCGCACGGCATTCCTGCTGGCGCAGCTCGACGGCCTGACTT
GCCCGCAGATCGCGGAGCGCATTGGCATGTCGCTGGCGACCGTCGAGCGGTACATCAGCCAGGCGCTGCGCCGATGCTAC
GCGTTGCAGTTCGGCGCTTAG

Protein sequence : 
MDPGTRSQVDVLYSRHHAWLQGWLLRKIGNACDAADIAQDVFVRVLHRKVVEIREPRTYLGTIANGLVIDFWRRRELEQA
WLETLAQLPEAHTPSPESRLHFLQTLIEIDQMLDTLKPNARTAFLLAQLDGLTCPQIAERIGMSLATVERYISQALRRCY
ALQFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-34 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rpoJ YP_586633.1 RNA polymerase sigma J factor VFG1049 Protein 1e-34 48