|
Name : secD (BCI_0599) Accession : YP_589026.1 Strain : Baumannia cicadellinicola Hc Genome accession: NC_007984 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 627805 - 629643 bp Length : 1839 bp Strand : + Note : identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129 DNA sequence : GTGTTAAACCACTATCCTTTGTGGAAATATATTATATTAGTCCTCACCCTAATATTAGGCATAATATATGCTCTTCCAAA TCTTTATGGAGAAGATGTTGCTATACAAATAACTGGCACTCACGGTGTTACAGTAAGTGAATCTACTCTCATTGATATTA TTCATATATTAAAGCAAAAAAATATTGTTAGTAAATCTATTTCATTAACTAATGGTACTATTCTAGCCAGATTTTCCAAT TCCAATATGCAATTGTATGCTCATGATACTTTACTAAAAACACTAGGCCATAATTATGTAGTAGCGCTTAACTTAGCACC AGCGGTACCCTCATGGTTAACTATGATAGGTGCATTACCTATTAAACTAGGTTTAGATTTAAGGGGAGGGGTACATTTTC TTATTGAAATAGATATGAATACAGTACTCAATAATATACATAAACAAGTTATAGATGTTTTTATCCAAGAACTACGGAAG AATAATATTCCTTATACATCAATAAGTAAAATTAATAATTATGGAAGTAAAGTTAACTTTCTTAATAGTTCTATCTGCGA CGAAGCACTAGCTAAACTGATGTCCATACACCGAGATATAGCTCTTATTAAAAAGGGCAAAAAATATAGCATTGAAATTT ATTTATTAGATAATAAATTACATGCAGCTAGTAACTTAGCTATACAACAGAATATTAATATTTTACGTAATCGCATAAAT AGATTAGGCATAGCTGAACCACTAATACAGCGTCAAGGAGTTAATAGTATTGTGGTCGAGTTACCTGGAATTCAAGATAC TGCCCGTGCTAAGGAAATAATAGGTGCTACGGCGATGTTAGAATTTCGTTTAGTCAATGAAGAACAATCAGAAGAACATA GTAAAATTACCAGTAATTCTGAAATAAAATTTACCCGTAACGGTACGCCAATCTTATTATATAAGCAAGTACTTCTTACT GGAGATCATATTACTAATGCTACTTTTAGTACTGATGAGTATAACCAGCCGCAAGTTAATATTACTCTTGATCATCAAGG TGGAAAAATTATGTCTAACTTCACAAAAGATAATATTAATAAGTTAATGGCAATACTATTTATTGAATATAAGAATAGTA GTGATAATATAAAAGATAATAACCTCTTTCTTAAGCAGGAAGAGGTCATAAATGTTGCTACTATCCAATCACACATTAGT AATATGTTTCGTATTACTGGTCTAAATAATAGACAAGAAGCCCGTAATCTTTCACTACTACTACGTGCGGGAGCATTGAT GGCACCTATTAAAATTGTTGAAGAGTGCACTATTGGCCCGACATTAGGTATGCAAAATATTAATCAAGGTTTAAAAGCTT GTTTGTGGGGACTAATAGCTGCTGTGCTATTTATGGTAATAAGATACCATAAATTCGGGATAATTGCTACTATAGCACTA ATTGCTAATATGATTCTAATAATTGGCATGATGTCGTTATTGCCAGGTGTTATTCTAACTATGCCGGGTATTGCTGGTAT AGTACTTACATTAGCAGTTGCGGTAGATGCTAATGTACTTATTTATGAACGTATCAAAGAAGAGCTAAGTAAAGAGCGTA GTATACAGCAAGCTATTTACCAAGGGTATCGTCGAGCGTTTTCTAGTATCATCGATGCAAATATTACGACTATAATTACA GCTATTATTCTATATGAGTTTGGTACTGGCTCTATTAAAGGTTTTGCAATTACAACCATAATTGGCATTGCTACTTCAAT GTTTACAGCGATACTAGGTACTCGTGCTATAGTTAACTTACTATATGGTAATAAGTTAATAGATAAACTTTCTATTTAG Protein sequence : MLNHYPLWKYIILVLTLILGIIYALPNLYGEDVAIQITGTHGVTVSESTLIDIIHILKQKNIVSKSISLTNGTILARFSN SNMQLYAHDTLLKTLGHNYVVALNLAPAVPSWLTMIGALPIKLGLDLRGGVHFLIEIDMNTVLNNIHKQVIDVFIQELRK NNIPYTSISKINNYGSKVNFLNSSICDEALAKLMSIHRDIALIKKGKKYSIEIYLLDNKLHAASNLAIQQNINILRNRIN RLGIAEPLIQRQGVNSIVVELPGIQDTARAKEIIGATAMLEFRLVNEEQSEEHSKITSNSEIKFTRNGTPILLYKQVLLT GDHITNATFSTDEYNQPQVNITLDHQGGKIMSNFTKDNINKLMAILFIEYKNSSDNIKDNNLFLKQEEVINVATIQSHIS NMFRITGLNNRQEARNLSLLLRAGALMAPIKIVEECTIGPTLGMQNINQGLKACLWGLIAAVLFMVIRYHKFGIIATIAL IANMILIIGMMSLLPGVILTMPGIAGIVLTLAVAVDANVLIYERIKEELSKERSIQQAIYQGYRRAFSSIIDANITTIIT AIILYEFGTGSIKGFAITTIIGIATSMFTAILGTRAIVNLLYGNKLIDKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-90 | 45 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-90 | 45 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-90 | 45 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-90 | 45 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-90 | 45 |
