Gene Information

Name : secF (BCI_0600)
Accession : YP_589027.1
Strain : Baumannia cicadellinicola Hc
Genome accession: NC_007984
Putative virulence/resistance : Unknown
Product : protein-export membrane protein SecF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 629654 - 630574 bp
Length : 921 bp
Strand : +
Note : identified by match to protein family HMM PF02355; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966

DNA sequence : 
ATGACTAGAAAAGAAAATAGTGTTGTTAATAAACTAGAGTCTAGCATTAAAGTATATGATTTTATGCGCTGGTCTTTTAT
AGCATTTAGTTCGTCTGTAATATTATTTCTTGCTTCTATTATCGTTATATTTATGCAAGGCTTTAATTGGGGACTAGATT
TTACTGGTGGTACGATAGTTGAACTGCACTTAGAGCAAACAATTGATATAGACCAAATCCGCAAAGCAATAGAACAATCT
GGATTTAAAGAGGCTATAGTGCAAAATTTTGGTAGTAGTCAAGATATAATAGTACGTATGCCATTTATGGCAAATAATAT
AGAGCGTAAGATTACTAGTGTAGTAAATGAAGTTACTCAACAAAATATAACGGTAAAAAGGGTGGAAGTAGTTGGACCAA
GCGTTAGCAACGATCTTTTACAAACTGGTAGTATAGCGCTACTACTAGCAATAATATGTATTTTTATCTACGTTATTTTC
CGCTTTGAATGGCGACTAGCAACTGGTACTGTCTTAGCATTAATTCATGATGTAGTTATTACATTAGGATTACTATCTGT
ATTTAAGATTGAAATAGAATCAACGATTATTGCATCATTAATTTCGGTAATAGGTTATTCCCTTAATGATAGTATTGTGG
TTTCTGATCGAATTCGTGAGAATTTCCGTGTAATTTCTAGCAGCAATACTTATGATCTATTTAATATTTCGATTACCCAA
GTTCTCAATAGAACGATTATAACATCAGTCATAACTATGACAGTAGTACTTATACTTATAATTTTTGGTGGCTCAATGTT
ACGTAGTTTTTCTATTACACTTTTTATAGGCGTATTGATAGGTACTATTTCCTCTATCTATGTTGCTTCTGCGTTAGCAC
TAAAGCTAGGTATAAAACGTGAACATATTATAGCAAGTTAA

Protein sequence : 
MTRKENSVVNKLESSIKVYDFMRWSFIAFSSSVILFLASIIVIFMQGFNWGLDFTGGTIVELHLEQTIDIDQIRKAIEQS
GFKEAIVQNFGSSQDIIVRMPFMANNIERKITSVVNEVTQQNITVKRVEVVGPSVSNDLLQTGSIALLLAIICIFIYVIF
RFEWRLATGTVLALIHDVVITLGLLSVFKIEIESTIIASLISVIGYSLNDSIVVSDRIRENFRVISSSNTYDLFNISITQ
VLNRTIITSVITMTVVLILIIFGGSMLRSFSITLFIGVLIGTISSIYVASALALKLGIKREHIIAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96066.1 SecF Not tested T-PAI Protein 5e-49 44
secF AAT96102.1 SecF Not tested T-PAI Protein 7e-49 43