Gene Information

Name : LI_r04 (LI_r04)
Accession : -
Strain : Lawsonia intracellularis PHE/MN1-00
Genome accession: NC_008011
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1403906 - 1405450 bp
Length : 1545 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGTGAAAGTCCTTCGGGATGA
GTAAAGTGGCGCACGGGTGAGTAACGCGTGGATAATCTACCTTCGAGACGGGGATAACGGCTGGAAACGGTCGCTAATAC
CGGATAACCATTATGGTAAAAAGTTGTAGTGCAAAGGGTAGCCTCTGTATGTAAGCTATCGCTTGAAGATGAGTCCGCGT
CCCATTAGCTAGTTGGTGAGGTAAATGCTCACCAAGGCGATGATGGGTAGCCGATCTAAGAGGATAATCGGCCACACTGG
AACTGGAACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCAGCGACG
CCGCGTGAGGGATGAAGGTCTTTGGATCGTAAACCTCTGTCAGGGGGGAAGAAATGGATGGGCTCTAATAGGGTCTATTT
TTGACGGTACCCCCAGAGGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGG
AATTACTGGGCGTAAAGCGCGCGTAGGTGGTTATATAAGTCAGGGGTGAAAGCCCACCGCTTAACGGTGGAACAGCCTTT
GATACTGTATAACTTGAGTATCGGAGAGGGTGGCGGAATTCCAGGTGTAGGGGTGAAATCCGTAGATATCTGGAGGAACA
CCAGTGGCGAAGGCGGCCACCTGGACGATAACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT
GGTAGTCCACGCTGTAAACGATGGGTGCTAGGTGCTGGGGAGTTATCTTCGGTGCCGTAGCTAACGCGTTAAGCACCCCG
CCTGGGGAGTACGGTCGCAAGGCTGAAACTCAAAGAAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATT
CGATGCAACGCGAAGAACCTTACCCAGGCTTGACATCTGAGGGACTCTTAAGAGATTAAGAGGTGCCTTTCGGGGAGCCT
CAAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATC
TTTAGTTGCCATCAAGTAAAGTTGGGCACTCTAGAGAGACTGCTCCGGTTAACGGGGAGGAAGGTGGGGACGACGTCAAG
TCATCATGGCCCTTACGCCTGGGGCTACACACGTACTACAATGGTGCACACAAAGGGCAGCAAGACCGCAAGGTGGAGCC
AATCCCAAAAAATGCATCTCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCCGAGAT
CAGCATGCTCGGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAAAGTTGGTTTTACCCAAAGCCG
GCGAGCTAACGAGCAATCGAGGCAGTCGTCTACGGTAGGGCTAATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGG
GAACCTGCGGCTGGATCACCTCCTT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-144 87.3
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-144 87.3
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-144 87.3
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-144 87.3
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-144 87
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-144 87