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Name : rnhA (LI0756) Accession : YP_595131.1 Strain : Lawsonia intracellularis PHE/MN1-00 Genome accession: NC_008011 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 943310 - 943795 bp Length : 486 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : GTGAGGAGTAACTACTTGAAATCGGTAGAAGTATTCACAGATGGTTCTTGTCTTGGTAATCCAGGGGCAGGTGGATGGGC AGCTATTTTACGTTATGGAGACTATGAACAGGAGATTTCGGGTGGTTTTAGTTACACAACAAATAACAGAATGGAAATGA TAGCAGCTATTTATGCTCTTGAAAAGCTAAAAGAATCTTGTTTAGTTATGTTATATACTGATTCTCAATATTTACGTAAT GCTGTGGAGAAACAGTGGTTAGTGTTTTGGGAGAAAAATAATTGGAAAACTGCAAGTAAAAAACCAGTGAAAAATCAAGA CCTATGGAAAAGACTGCAACGTCAACTTGAGCGCCATAATGTTATATTTACATGGGTTAGAGGGCATAGTGGTCATTTTG AAAATGAACGATGTGATAATCTTGCACGAATGGAAGCTTCTCGTTCAAATTTGCCCAAAGATTGTGGGTTTATCAATGAG GGGTAA Protein sequence : MRSNYLKSVEVFTDGSCLGNPGAGGWAAILRYGDYEQEISGGFSYTTNNRMEMIAAIYALEKLKESCLVMLYTDSQYLRN AVEKQWLVFWEKNNWKTASKKPVKNQDLWKRLQRQLERHNVIFTWVRGHSGHFENERCDNLARMEASRSNLPKDCGFINE G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 5e-35 | 52 |
