Gene Information

Name : Dgeo_0624 (Dgeo_0624)
Accession : YP_604095.1
Strain : Deinococcus geothermalis DSM 11300
Genome accession: NC_008025
Putative virulence/resistance : Unknown
Product : FAD linked oxidase-like protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 669281 - 670729 bp
Length : 1449 bp
Strand : +
Note : PFAM: FAD linked oxidase-like: (2.4e-89); KEGG: dra:DR1731 glycolate oxidase subunit GlcD, ev=0.0, 80% identity

DNA sequence :
GTGATCCCCGAGAAACGGTCGCTCACGACCACCTCCCCCGCCCCCAAGCCCCGCTCGAACGGCATGCCGGACAACGCGCT
GGCCGCCGAACTCACCCGCCTGCTCGGCCCCAAGAAGGTGCTGTCGAGTCTCTCCGAGCGTCTGAATTACCGCTATGACG
CCATTCAGTTTGGGGCAACGCCGCTCGCGGTGGTGCTGCCCGAGAACACGGCGGACGTGGTGATGGCGGTGCGAGTCGCG
CGGGCAGCGGGCGTGCCGGTTGTGGGGCGCGGGGCGGCGAGCGGCCTTTCGGGGGGGGCGGCTCCGGCGCAGCCAGGACT
GGTGATCTCCTTTACCCGGATGACCCGGCTGGAGATCTTCCCCGAGCAGCGCGAGGCGCGGGCCCAGGCGGGTGTGGTGA
CGCTGGCAGTGACGGAAAAGGCGAAGCCCTTTGGTTTGATTTACCCCCCTGACCCCGCCAGTTTCCGCACCAGCACGATT
GGCGGCAACCTGGGTGAGAACGCGGGTGGGCCGCTGTGCTTCAAGTACGGCGTGAGCGGCGATTACGTGAAGGCGCTGGA
ATTCGTGGACGCGGATGGCGAGGTGCATGCGCTCGCGCGGGACGCCTACGACCTGGCCGGGCTGCTGATCGGCTCGGAGG
GAACGCTTGGCCTGATCACCGAGGCGACGCTGCGCCTGACGCCGCCCCCGAGGTTCACCCGCACCCTGATGGCGAGTTTC
GCGGAAGTGGGTGCTTGCGCCGAGGCCGTCAGCGCCGCAATTGCCGCCGGGGCCGTGCCGGCCAAGCTGGAATTCATGGA
CCAGGCCTGCATCAACGCCGTCGAGGACTTTCTGCACCTCGGCCTTCCGCGGGAGGCGGGGGCACTCCTGCTGGTCGACA
CCGATGGCGACGATCTGGACACGGTGGAGGAGGAACGCGCGCTTGTGGAGGCTGCCTGCCTGGCGGCGGGAGGAATGGTG
CGCCGCGCCGCGGGAGATGCCGAGAGCGCTGCCCTCTGGCAGGCCCGCCGCAGCGTCAGCCCTGCGCTGGGCCGCATCCG
CCCGCAGCGCATGAACGAGGACATCGTGGTGCCCCGCTCGGCCCTGCCGGAGGTGGTGCGGGAAATCCGGGCGCTGGGCG
ACGCTTCCGGGTTGCCCCTGGTGCAGTTTGGACACATTGGGGACGGCAACTTGCATCCCAACATCCTCTTTGATCCCCGG
CGCGAGTCCCCGGAAGCGGTCCATGACCTCGCCCACCAGATTGCCCTCGTCGCTCTGCGGCACGGCGGCGTCCTCAGCGG
CGAACACGGCATCGGGACCATGAAGCGGCCCTTTATGCGCGAGGCGGTGGACCCGGTGACGCTGGAAGCCTTGTGGAACG
TGAAGCGGGCGCTGGACCCGGCAGGGGTGCTGAATCCCGGCAAGATTCTGCCCGGTGAGGCGCAGGAGGTTGCGCATGCC
CATCCTTGA

Protein sequence :
MIPEKRSLTTTSPAPKPRSNGMPDNALAAELTRLLGPKKVLSSLSERLNYRYDAIQFGATPLAVVLPENTADVVMAVRVA
RAAGVPVVGRGAASGLSGGAAPAQPGLVISFTRMTRLEIFPEQREARAQAGVVTLAVTEKAKPFGLIYPPDPASFRTSTI
GGNLGENAGGPLCFKYGVSGDYVKALEFVDADGEVHALARDAYDLAGLLIGSEGTLGLITEATLRLTPPPRFTRTLMASF
AEVGACAEAVSAAIAAGAVPAKLEFMDQACINAVEDFLHLGLPREAGALLLVDTDGDDLDTVEEERALVEAACLAAGGMV
RRAAGDAESAALWQARRSVSPALGRIRPQRMNEDIVVPRSALPEVVREIRALGDASGLPLVQFGHIGDGNLHPNILFDPR
RESPEAVHDLAHQIALVALRHGGVLSGEHGIGTMKRPFMREAVDPVTLEALWNVKRALDPAGVLNPGKILPGEAQEVAHA
HP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 6e-40 42