Gene Information

Name : Dgeo_0638 (Dgeo_0638)
Accession : YP_604109.1
Strain : Deinococcus geothermalis DSM 11300
Genome accession: NC_008025
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 694567 - 694830 bp
Length : 264 bp
Strand : -
Note : PFAM: Cold-shock protein, DNA-binding: (2.2e-34) Ribonuclease B, OB region-like: (0.0062); SMART: Cold shock protein: (1.9e-32); KEGG: dra:DR0907 cold shock protein, CSD family, ev=2e-38, 85% identity

DNA sequence :
ATGGCTGTAGGTAAAGTGAAGTGGTTCAACGCGGAAAAGGGCTATGGGTTCATCGAGACGGAAGGCAGCGAGGACGTGTT
TGCACACTTCAGCGCCATTCAGGCTCAGGGCTTCAAGAAGCTGAACGAGGGCGACGAGGTCGAATTTGAAATCGAACCTG
GTCAACGTGGCAAGGGTCCGCAAGCGAGAAACATCGTCGTGACCAAGGCCGCCCCGGCTCCCGCCTATGGCGACCGGCCT
GCCCGCCGCAACGACCGCTGGTAA

Protein sequence :
MAVGKVKWFNAEKGYGFIETEGSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQARNIVVTKAAPAPAYGDRP
ARRNDRW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-13 59