Gene Information

Name : PSEEN2499 (PSEEN2499)
Accession : YP_608106.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma-70 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2616891 - 2617418 bp
Length : 528 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator

DNA sequence :
GTGGACAAGGGATCGTTCGCACTCCGACAACAACTGGAACAGTTGTATGTCGACCATCATGGCTGGCTGTGCAACCTGCT
GCGGCGCAAGCTGGGCAATGCCTGCGACGCCGCCGACCTGGCCCACGACATCTGCCTCATCCTGCTGAACAAGGGCTGCG
TGCCTGCGGCACAGGACTGCCGCCGCCACCTGGCGCAGATCGCCAATGGCAAGGTGATCGACCTGTACCGGCGACGCCAG
CTCGAGGCCCGCTACCTCGACGAACTCATGCAGCGCGACGAAGCCCTGGCCCCTTCCGAGGAGATCCGCGCCCTGGCCCT
GGAGGCGCTGGTCGAGGTCGATGCCGCCTTGCAGCGCCAATCCGCCAACAGCCGCCGGGCGCTGTTGCTGCACAAGCTCA
ACGGCATGGCCCACCGCGAGATCGCTACCGAGTTGAAGGTGTCGGTGTCGTCGGTCGAGAAGTACATCGCCTCGGCCCTG
CGTAGTTGCTCGCCATTTTCGCCGGCACTGCTGAATGAATCGCATTGA

Protein sequence :
MDKGSFALRQQLEQLYVDHHGWLCNLLRRKLGNACDAADLAHDICLILLNKGCVPAAQDCRRHLAQIANGKVIDLYRRRQ
LEARYLDELMQRDEALAPSEEIRALALEALVEVDAALQRQSANSRRALLLHKLNGMAHREIATELKVSVSSVEKYIASAL
RSCSPFSPALLNESH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN2499 YP_608106.1 RNA polymerase sigma-70 factor VFG1049 Protein 7e-20 42