Gene Information

Name : PSEEN2531 (PSEEN2531)
Accession : YP_608134.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2652026 - 2652541 bp
Length : 516 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator

DNA sequence :
ATGTCCACCGTTGTGTCCGACGGAGCTGCACACTTTGGCTTGGAAACGCTCTACCGCGAGCACAGCGGCTGGCTGCACGG
CTGGTTGCGCCAGCGGCTGAACAACACCGCCGATGCCGCCGACCTGGCCCAGGACACGTTCATCCGGGTGCTGCTGGCCC
GCACCGCTGGCACGCTCAACCAACCGCGCCACTACCTGGCGACCATCGCCCGTGGCCTGGTCATCGACCTGTACCGCCGC
CGCAGCCTGGAAAACGCCTACCTCGAAGCCCTGGCACAACAGCCGGAGCACTACGCGCCCTCCGCCGAAACCCGGGCCGC
CGTCCTTGATACCCTGATGGCCATCGACCGCATGCTCGATGGCCTCGGCCCACGCACGCGGGCGATCTTTCTCGCCGTGC
AGCTCGACGGCCTGAGCTACGAAAAAGCCGCCGAACACCTCGGCGTTTCGGTGACCACCGTGCGCAAGCACCTGGCGCGT
GCACTGATGCATTGCCTGCTGATCGAGGGCGCATGA

Protein sequence :
MSTVVSDGAAHFGLETLYREHSGWLHGWLRQRLNNTADAADLAQDTFIRVLLARTAGTLNQPRHYLATIARGLVIDLYRR
RSLENAYLEALAQQPEHYAPSAETRAAVLDTLMAIDRMLDGLGPRTRAIFLAVQLDGLSYEKAAEHLGVSVTTVRKHLAR
ALMHCLLIEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 8e-38 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN2531 YP_608134.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 3e-38 50