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Name : PSEEN4571 (PSEEN4571) Accession : YP_610035.1 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 4891792 - 4892286 bp Length : 495 bp Strand : + Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : GTGCCCAGCGCCCTCTCTTCCACCGTCGAAGGCCTCTATGTCGCCCACCACAGCTGGTTGACCGGCTGGCTGCGCCGGCG CCTGGGCTGCCCGCAGAGCGCCGCCGACCTGGCCCAGGACACCTACGTGCGCCTGCTCCAGGCCCGCGAGACGCCACAAC TGATCGAGCCCCGCGCCTTCCTCACCACCGTGGCCAAGCGCGTGCTGTGCAACCACTTCCGCCGCCAGGAGCTGGAGCGC GCCTACCTCGAGGCCCTGGCCCAGGTGCCCGAGCAAGTGGCGCCGAGCGAAGAGGACAAGGCAATCATCTTCGCCACCCT GCTCGAGCTCGACCGCCTGCTCGATGGCCTGGCGCCGCTGGTCAAACGCGCCTTCCTGCTGGCCCAGGTCGATGGCCTGG GCCAGGGCGAGATCGCCCGCGAACTGGGCATCTCGCTGGCCACCGTCAAGCGCTACCTGAACAAGGCAGCCCTGCGCTGC TACTTCGCCCTGTGA Protein sequence : MPSALSSTVEGLYVAHHSWLTGWLRRRLGCPQSAADLAQDTYVRLLQARETPQLIEPRAFLTTVAKRVLCNHFRRQELER AYLEALAQVPEQVAPSEEDKAIIFATLLELDRLLDGLAPLVKRAFLLAQVDGLGQGEIARELGISLATVKRYLNKAALRC YFAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 2e-29 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEEN4571 | YP_610035.1 | RNA polymerase sigma factor | VFG1049 | Protein | 1e-29 | 48 |
