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Name : PSEEN5131 (PSEEN5131) Accession : YP_610543.1 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 5448841 - 5449359 bp Length : 519 bp Strand : + Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : TTGACGTCTGCGCAGAGTCCACATGCCGATCTGGTCGGGGCGCTGTACCGCGACCATCGCGGCTGGCTACTCGCCTGGCT GCAGCGCAGCACCGCCTGCCGCCAGCGCGCCGAGGACCTCAGCCAGGACACCTTCGTGCGCCTGCTCGGCCGCGAACGCC TGGACACCCCTCGCGAACCCCGGGCGTTCCTGGCTGCCGTCGCCAAGGGGCTGCTGTTCGACCATTTCCGCCGCGCGGCC CTGGAACAGGCCTACCTTGCGGAGCTTTCTCTGTTGCCAGAGACTGAGCACCCCTCCCCGGAACTGCAACACTTGATCCT CGAAGACCTCAAGGCCATCGACCGCCTGCTCGGCAAGCTGTCGAGCAAAGCCCGCGCCGCCTTCCTGTACAACCGCCTGG ACGGCCTGGGCCATGCCGAGATCGCCGAGCGCCTGGGCGTTTCGGTGTCGCGTGTGCGCCAGTACATCGCCCAAGGCCTG CGCCAGTGCTATGTCGCCTTGTACGGGGAACCGACATGA Protein sequence : MTSAQSPHADLVGALYRDHRGWLLAWLQRSTACRQRAEDLSQDTFVRLLGRERLDTPREPRAFLAAVAKGLLFDHFRRAA LEQAYLAELSLLPETEHPSPELQHLILEDLKAIDRLLGKLSSKARAAFLYNRLDGLGHAEIAERLGVSVSRVRQYIAQGL RQCYVALYGEPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 5e-33 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEEN5131 | YP_610543.1 | RNA polymerase sigma factor | VFG1049 | Protein | 2e-33 | 46 |
