Name : TM1040_1003 (TM1040_1003) Accession : YP_612998.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : periplasmic protein thiol-disulfide oxidoreductase DsbE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0526 EC number : - Position : 1073620 - 1074156 bp Length : 537 bp Strand : + Note : TIGRFAM: periplasmic protein thiol: (1.2e-69); PFAM: Redoxin: (1.3e-15); KEGG: sil:SPO2314 periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily, ev=4e-73, 71% identity DNA sequence : ATGGCTAAGATCTCTTTGATGATGGCTATTCCAGTGGTCGTCTTTTCCGGCTTTGTTGGCCTTGCCCTCGTGGGCATGGG CCGCGACGATCCCGAAAGCCTGCCCTCGGCGCGCGAAGGCAAAGCAGCGCCCTCCGTCGCGCTCAGCGATTTTCCCGGCA AAGAGAGCTTTGACGACGCCACCCTGCGCGACGGCACCGTAAAGCTTGTCAATTACTGGGCGAGCTGGTGTGGCCCCTGC CGCGCCGAACACCCGAGCCTGACCGCGCTTTCCGAGGAAGGCGTGCCGATCTACGGCGTGAACTACAAGGATCAGCTGGC CAATGCCCAGAGTTTCCTCGAGGAACTCGGCGATCCCTATGCCGGTGTGGGTCGGGATGAACAGGGGCGTATGGCGCTGG ATTGGGGGCTGTATGGCGTGCCCGAAACGTATGTCATCGACGGCGACGGCACGGTGGTTCTGCGCTTTGCCGGGCCGATT ACCAGCCGGGTTCTGGAAGAGACCATTCGCCCCGCCATGGAGCGCGCGGCCCAGTAA Protein sequence : MAKISLMMAIPVVVFSGFVGLALVGMGRDDPESLPSAREGKAAPSVALSDFPGKESFDDATLRDGTVKLVNYWASWCGPC RAEHPSLTALSEEGVPIYGVNYKDQLANAQSFLEELGDPYAGVGRDEQGRMALDWGLYGVPETYVIDGDGTVVLRFAGPI TSRVLEETIRPAMERAAQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ccmG | YP_217240.1 | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis | Not tested | SPI-12 | Protein | 3e-24 | 43 |