Gene Information

Name : TM1040_1003 (TM1040_1003)
Accession : YP_612998.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : periplasmic protein thiol-disulfide oxidoreductase DsbE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0526
EC number : -
Position : 1073620 - 1074156 bp
Length : 537 bp
Strand : +
Note : TIGRFAM: periplasmic protein thiol: (1.2e-69); PFAM: Redoxin: (1.3e-15); KEGG: sil:SPO2314 periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily, ev=4e-73, 71% identity

DNA sequence :
ATGGCTAAGATCTCTTTGATGATGGCTATTCCAGTGGTCGTCTTTTCCGGCTTTGTTGGCCTTGCCCTCGTGGGCATGGG
CCGCGACGATCCCGAAAGCCTGCCCTCGGCGCGCGAAGGCAAAGCAGCGCCCTCCGTCGCGCTCAGCGATTTTCCCGGCA
AAGAGAGCTTTGACGACGCCACCCTGCGCGACGGCACCGTAAAGCTTGTCAATTACTGGGCGAGCTGGTGTGGCCCCTGC
CGCGCCGAACACCCGAGCCTGACCGCGCTTTCCGAGGAAGGCGTGCCGATCTACGGCGTGAACTACAAGGATCAGCTGGC
CAATGCCCAGAGTTTCCTCGAGGAACTCGGCGATCCCTATGCCGGTGTGGGTCGGGATGAACAGGGGCGTATGGCGCTGG
ATTGGGGGCTGTATGGCGTGCCCGAAACGTATGTCATCGACGGCGACGGCACGGTGGTTCTGCGCTTTGCCGGGCCGATT
ACCAGCCGGGTTCTGGAAGAGACCATTCGCCCCGCCATGGAGCGCGCGGCCCAGTAA

Protein sequence :
MAKISLMMAIPVVVFSGFVGLALVGMGRDDPESLPSAREGKAAPSVALSDFPGKESFDDATLRDGTVKLVNYWASWCGPC
RAEHPSLTALSEEGVPIYGVNYKDQLANAQSFLEELGDPYAGVGRDEQGRMALDWGLYGVPETYVIDGDGTVVLRFAGPI
TSRVLEETIRPAMERAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmG YP_217240.1 heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis Not tested SPI-12 Protein 3e-24 43