Gene Information

Name : TM1040_1074 (TM1040_1074)
Accession : YP_613069.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding protein family protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1150412 - 1150618 bp
Length : 207 bp
Strand : -
Note : PFAM: Cold-shock protein, DNA-binding: (2.5e-28); SMART: Cold shock protein: (2.4e-25); KEGG: rsp:RSP_0591 cold-shock protein, ev=9e-23, 72% identity

DNA sequence :
ATGGCTAATGGTACCGTGAAGTGGTTTAACTCCACCAAAGGTTACGGCTTCATCGCGGTTGAAGGCCGCTCCAACGACGT
GTTCGTGCACATCTCCGCAGTGGAACGCTCCGGTCTGACCGGTCTGGCCGACGGCCAGGCAGTGACCTTCGAGATCCAGT
CCGGTCGTGACGGCCGCGAATCCGCAACCGATCTGGCTCTGGCCTAA

Protein sequence :
MANGTVKWFNSTKGYGFIAVEGRSNDVFVHISAVERSGLTGLADGQAVTFEIQSGRDGRESATDLALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-11 43