Gene Information

Name : TM1040_1111 (TM1040_1111)
Accession : YP_613106.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : -
Position : 1192007 - 1193008 bp
Length : 1002 bp
Strand : -
Note : KEGG: sil:SPO2198 glyceraldehyde-3-phosphate dehydrogenase, type I, ev=1e-167, 87% identity; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I: (4.1e-169); PFAM: glyceraldehyde 3-phosphate dehydrogenase: (5.5e-59)

DNA sequence :
ATGACCATCAAAGTTGGAATCAATGGCTTCGGACGTATCGGCCGCTGCACCCTCGCCCATATCGCGGGCAGCTTTCGCAA
CGATATCGAGGTGATCAAGGTCAATGCGACCGGCCCGATCGAGACGGCAGCGCATCTCATCAAATACGACAGCGTGCATG
GCCGTTTCCCCGGTCAGGTCGATTTCAGCGAAGGCCGCCTGAACCTTGGCCGCGGCGACATGCAGGTGTTTTCCACCTAC
GACATGGACACGCTGGACTGGGAAGGCTGCGATGTCGTGCTGGAATGCACCGGCAAATTCAACGATGGCCTGAAGGCGAA
GAAGCACCTCGAGCGCGGCGCAGGCAAGGTTCTGCTGTCCGCACCTGGCAAGAACGTGGACCGCACCGTGGTTTACGGCG
TCAACGACGAGGATCTTCTGTCCACCGACAAGATGGTCTCCAACGGGTCTTGCACCACCAACTGCCTTGCACCGCTGGCC
AAGGTACTGGACGAGGCCTTTGGCATCGAGCATGGCATCATGACCACCATCCACGCCTACACCGGCGATCAGCCGACGCT
AGACCGCCGTCACGACGATCTCTACCGCGCCCGTGCGGCAGCGATGTCGATGATCCCGACCTCTACGGGCGCGGCCAAGG
CGCTGGGTGAGGTTCTGCCGAACCTCAAGGGCCGTCTCGATGGCTCAGCGATCCGCGTGCCGACCCCGAATGTGTCCGCG
GTGGACCTGACCTTCCGCGCGGGGCGCGAGGTCACCGCCGAAGAGGTGAACGCCGCCGTGGCAGAGGCGTCCAAGGGCCA
TATGTCGCGCGTTCTGGGCTATGAGCCCGCGCCGCTGGTCTCGACCGACTTCAACCACACCGAAGAAAGCTCCATCTTTG
CGCCCGACCAGACCCGCGTGGTCGACGGTCGCATGGTGCGCGTGCTGGCGTGGTATGACAACGAATGGGGCTTCTCGGTC
CGGATGGCCGATGTTGCCACCGCCATGGGTCGCCTGAACTAA

Protein sequence :
MTIKVGINGFGRIGRCTLAHIAGSFRNDIEVIKVNATGPIETAAHLIKYDSVHGRFPGQVDFSEGRLNLGRGDMQVFSTY
DMDTLDWEGCDVVLECTGKFNDGLKAKKHLERGAGKVLLSAPGKNVDRTVVYGVNDEDLLSTDKMVSNGSCTTNCLAPLA
KVLDEAFGIEHGIMTTIHAYTGDQPTLDRRHDDLYRARAAAMSMIPTSTGAAKALGEVLPNLKGRLDGSAIRVPTPNVSA
VDLTFRAGREVTAEEVNAAVAEASKGHMSRVLGYEPAPLVSTDFNHTEESSIFAPDQTRVVDGRMVRVLAWYDNEWGFSV
RMADVATAMGRLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 3e-62 45