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Name : TM1040_1127 (TM1040_1127) Accession : YP_613122.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1211514 - 1213478 bp Length : 1965 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF: (1.3e-213); PFAM: cytochrome c assembly protein: (3.6e-85); KEGG: sil:SPO1880 cytochrome c-type biogenesis protein CcmF, ev=0.0, 82% identity DNA sequence : ATGATTACAGAGCTCGGTCACTTCGCCCTCATCCTCGCCTTTATGATCGCCATCGTGCAGACGGTTGTGCCCCTGATTGG TGCGCATAAACGCTGGCCCGGCTGGATGGCCGTGGCGGAACCCGCAGCGCAGGCCCAGTTCCTGTTTACGGCGTTTTCCT TTGGGGCGCTCACATGGGCCTTTGTGACCTCGGATTTCTCGCTGCGGCTGGTGACGCTCAACAGCCACTCCGCCAAACCG ATGATCTACAAGATCTCGGGCACTTGGGGGAACCATGAGGGCTCCATGCTGCTCTGGGTGCTGATCGTGACCCTCTTTGG GGCCTTGGCCTCGGTGTTTGGAGGCGGGCTGCCGCCGACACTCAAGGCGCGGGTGCTCAGTGTGCAATCGGCCATTGGCG TGGCCTTTTTCGCGTTCATCCTCTTTACCTCCAACCCCTTCTTGCGGCTGGAAAACCCTCCCTTTGACGGGCAGGATCTC AATCCGCTCCTGCAAGATCCGGGCCTCGCGTTCCACCCGCCGTTTCTGTACTTGGGCTATGTGGGGCTCTCGATGGCGTT CTCCTTTGCTGTGGCTGCCCTGATCGAAGGGCGGGTTGATGCGGCCTGGGGGCGCTGGGTCCGGCCCTGGACATTGGCGG CGTGGGTGTTCCTGACCATCGGCATCGCGCTGGGGTCCTGGTGGGCCTATTACGAGCTTGGCTGGGGCGGCTTCTGGTTC TGGGATCCGGTGGAGAATGCGTCCTTCATGCCATGGCTTCTCGCCGCTGCGCTTCTGCATTCCGCGATCGTGGTGGAAAA GCGCGAGGCGCTCAAGAGCTGGACCATCCTTCTCGCGATCCTCGCCTTTGGCTTTTCGCTCATCGGCACCTTCATCGTGC GCTCTGGGCTTTTGACCTCGGTGCATGCCTTTGCCAATGATCCAGAGCGTGGCGTGGTGATCCTTGGAATTCTCGCCTTC TTTACCGGCGGCGCGCTGCTGCTCTTTGCCCTGCGCGCGCAGGCTATGGAGGCCAAAGGCGTGTTCTCCATGGTCAGCCG GGAGAGCGCGCTGGTGGCCAACAACCTCTTGCTGGCGGTCAGCTGCTTTGTGGTTTTTGTTGGCACGCTCTGGCCGGTGG TGGCGGAGATGGCCTTTGATCGCAAGCTCTCGGTCGGGGCACCGTTCTTTGATGCGGCCTTCCCGCCCTTCATGGTGGCG CTGGGGCTCTTGCTGCCGATCGGCTCAATGCTGCCGTGGAAGCGCGGTAAAGGCGCCAAGACGCTCTGGACGCTGCGCTA TGGCATCGTACTGGCGCTGGCCCTTGCGGGGCTCGCCTGGGCGATCCAGACCGAAAAGAGCCTGCTTGGCCCCGTTGGCG TTCTGCTGGGCGCTTGGGTCGTAAGCGGCGCTGCACTTGATTTGTTGCAACGCGCAGGGCGCAAGGACCGGCTCTCGCGC CTGATGCGGTTGCCGCGTGCCGATTGGGGCAAGGCGGTGGCGCATGCCGGGCTTGGCGTGACGATCTTTGCCGTGGCAGG GCTGACGGCCTGGCAAAAAGAAGACATCCGTGTTGCCAACCTCAATGAGCCGTTCCGCGTCGGTCCCTTTGAACTGGTGC TGTCTGCGGTCGAAGAGGGGCGCGGGCCGAATTACTTCACCACGATGGGCGTGGTGGATGTGACCCGCAACGGCAAGGAC GTCGCAACGCTGCGGCCGGAGAAACGCGTCTATCCGGTGGCGCAGATGCCCACCACGGAGGCGGCGATTGATTATCGGTT CACCCGCGATCTCTATGTGGTGCTGGGCGATGCGCAAGAGGGCGGCGGATTTACTCTGCGCACCTATATCAAGCCCTTCG CCAACTGGATCTGGGGCGGCAGCCTGCTGATGGCCCTTGGCGGCTTCCTGAGCCTCTCGGACCGTCGGTTCCGGGTTGCG GCCGGGGTGCGCAAGGCCCCCACCGAGGGGGTGCCCGCGGAATGA Protein sequence : MITELGHFALILAFMIAIVQTVVPLIGAHKRWPGWMAVAEPAAQAQFLFTAFSFGALTWAFVTSDFSLRLVTLNSHSAKP MIYKISGTWGNHEGSMLLWVLIVTLFGALASVFGGGLPPTLKARVLSVQSAIGVAFFAFILFTSNPFLRLENPPFDGQDL NPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWGRWVRPWTLAAWVFLTIGIALGSWWAYYELGWGGFWF WDPVENASFMPWLLAAALLHSAIVVEKREALKSWTILLAILAFGFSLIGTFIVRSGLLTSVHAFANDPERGVVILGILAF FTGGALLLFALRAQAMEAKGVFSMVSRESALVANNLLLAVSCFVVFVGTLWPVVAEMAFDRKLSVGAPFFDAAFPPFMVA LGLLLPIGSMLPWKRGKGAKTLWTLRYGIVLALALAGLAWAIQTEKSLLGPVGVLLGAWVVSGAALDLLQRAGRKDRLSR LMRLPRADWGKAVAHAGLGVTIFAVAGLTAWQKEDIRVANLNEPFRVGPFELVLSAVEEGRGPNYFTTMGVVDVTRNGKD VATLRPEKRVYPVAQMPTTEAAIDYRFTRDLYVVLGDAQEGGGFTLRTYIKPFANWIWGGSLLMALGGFLSLSDRRFRVA AGVRKAPTEGVPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-115 | 48 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-94 | 47 |
