Gene Information

Name : TM1040_1240 (TM1040_1240)
Accession : YP_613235.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : BadM/Rrf2 family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1959
EC number : -
Position : 1335357 - 1335815 bp
Length : 459 bp
Strand : +
Note : PFAM: protein of unknown function UPF0074: (1.8e-40); KEGG: sil:SPO2025 iron-sulfur cluster assembly transcription factor IscR, , ev=2e-71, 88% identity

DNA sequence :
ATGAAGCTTTCGACAAAAGGACGGTACGCAATGGTGGCCTTGGCTGACATCGCGTTGCAGCCATCAGAGGGACTGGTCGT
CCTGGCCGATATCTCCAAGCGTCAGCAGATCTCTTTGCCGTATCTCGAGCAGCTCTTCGTGAAACTACGTCGTGGCGGGC
TTGTGGCCTCCGTGCGTGGGCCCGGGGGTGGGTATCGTCTGGCGCGGCCCGCATCCGAAATTCGGGTCGTTGAGATCCTC
GCCGCCGTTGATGAGACCGTAGACGCCATGCACAAGGGGGCAGGGGCGTCGGGTGGATCAAGTGGGAGCAGGGCGCAATC
ACTGACCAACCGTCTGTGGGAGGGGCTGAGTGCGCATGTCTACGTCTTTCTTCATCAAACACGCCTTTCGGATGTGATCG
AGAACGACCTCGCGCCCTGTCCAGCAGTGCCCAATCTCTTCTCCGTGGTCGATGAATAG

Protein sequence :
MKLSTKGRYAMVALADIALQPSEGLVVLADISKRQQISLPYLEQLFVKLRRGGLVASVRGPGGGYRLARPASEIRVVEIL
AAVDETVDAMHKGAGASGGSSGSRAQSLTNRLWEGLSAHVYVFLHQTRLSDVIENDLAPCPAVPNLFSVVDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96061.1 rrf2 family protein Not tested T-PAI Protein 1e-27 51