Gene Information

Name : TM1040_0417 (TM1040_0417)
Accession : YP_612412.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : -
Position : 427011 - 428015 bp
Length : 1005 bp
Strand : -
Note : KEGG: sil:SPO0701 glyceraldehyde-3-phosphate dehydrogenase, type I, ev=1e-149, 79% identity; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I: (3.1e-179); PFAM: glyceraldehyde 3-phosphate dehydrogenase: (1.8e-82)

DNA sequence :
ATGACCCTTAAAATCGCGATCAATGGATTTGGCCGGATCGGCCGCAACGTGCTGCGTGCACTTTTGGAGAACGACACCAC
CGACGTTGAGGTGGTGGCGATCAACGATCTCGCCCCCCCGGCAACCCAAGTCCACCTGCTGAAGTTCGACAGCGTTCACG
GCCGCCTCGACGCAGAGGTTACAGTCGAGGGCGATACCATGAAAGTGGGCCGCCATGAGATCCGCCTGACGGCCATCCGC
AACCCAGAAGAGCTGCCCTGGTCCGATGTCGATATCGCCTATGAATGCACTGGCCTCTTCACTACCCGCGACAAAGCAGC
CGCGCATCTGAAAAACGGCTCCAAACGCGTGCTGATTTCCGCGCCGGGGACCGAAGTTGACCGCACCGTGGTCTTTGGCG
TCAATGATCGCGACCTCACCGCAGAGGACATCGTGGTGTCCAACGCCTCCTGCACCACCAACTGCCTTGCCCCGGTGGCC
AAGGTTCTGGACGACGCCTTTGGGATCAAGACCGGTTATATGACCACGATCCACGCCTACACAGGCGACCAGCCGACCCA
TGACACCACCCACAAGGATCTCTACCGCGCCCGCGCGGCAGCGCTCTCGATGATCCCAACATCTACCGGCGCGGCGCGCG
CGATCTCCCTGGTGCTGCCACACCTCAAGGGCCGCCTTGAAGGTTCCGCCATTCGCGTCCCGACACCAAATGTCTCGGTG
GTGGACCTGACGTTCCAGCCCGAGCGTGTCGCTTCGGTCGAAGAGATCAACGCCGCGATCGCGGCCGCCGCAAAAGAGGG
CCCGCTTCAGGGCATTCTCGGCTATGAAGAGGCTCCACTGGTGTCCATCGACTTCAACCACGACAAGCGGTCGTCGATCT
TCGCCGCCCCACAAACCGCCGTGACCTCCGAGGGCCTGGTGCGCGTGGTGAGCTGGTATGACAACGAGTGGGGCTTTTCG
AACCGCATGATCGACACCGGCCGCGCCATGGGCAAATTCCTCTGA

Protein sequence :
MTLKIAINGFGRIGRNVLRALLENDTTDVEVVAINDLAPPATQVHLLKFDSVHGRLDAEVTVEGDTMKVGRHEIRLTAIR
NPEELPWSDVDIAYECTGLFTTRDKAAAHLKNGSKRVLISAPGTEVDRTVVFGVNDRDLTAEDIVVSNASCTTNCLAPVA
KVLDDAFGIKTGYMTTIHAYTGDQPTHDTTHKDLYRARAAALSMIPTSTGAARAISLVLPHLKGRLEGSAIRVPTPNVSV
VDLTFQPERVASVEEINAAIAAAAKEGPLQGILGYEEAPLVSIDFNHDKRSSIFAAPQTAVTSEGLVRVVSWYDNEWGFS
NRMIDTGRAMGKFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 1e-70 48