Gene Information

Name : TM1040_0711 (TM1040_0711)
Accession : YP_612706.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : -
Position : 763923 - 766052 bp
Length : 2130 bp
Strand : -
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGAGCCGGATTGAACGCAATGGACTTCAGGTCGCCTCCGAACTGGTGGCTTTTGTAGAGGACCAGGCGCTGCCGGGCAC
CGGCGTCAGCAAGGAGGCGTTCTGGGCCGGGCTTGCGGGGCTGGTCGAGGGTATGGGCGATGAAAACCGCGCCCTTCTTG
CCAAACGTGCGGAGATTCAGGGACAGATCGACGCCTGGCATCTGGAACACCGTGGCCAGCCGCATGATGCCGCAGCCTAC
AAGGACTTTTTGACCGAGATTGGCTATTTGGTGCCGGAGGGACCGGATTTTGAGGTGGAAACCCAGAATGTTGACCCCGA
GATCGCGCATGTACCTGGGCCGCAGCTGGTGGTTCCGATCACCAACGCCCGCTTTGCGCTCAATGCAGCGAACGCCCGCT
GGGGCAGTCTTTATGATGCGCTCTATGGCACCGATGCCATGGGCGATCTTCCGAGCGGTTCGGGTTACGATGCGGAGCGT
GGCGCACGGGTGATCGCATGGGGACGTCAATTCCTCGATGAGACCTTCCCGCTTACGGCGGGCTCCTGGTCCGATGTGGC
AGCGCTTCAGGTGCAGGATGGCGCCCTCGCGCCCGCACTCAAGGACGCAACCCAGTTTGCAGGCTACGCTGGCGACGCGA
CCAGTCCGCGCCGCATCCTGCTGAAAAACAACGGCCTGCACGCGATCCTCGAGATCGACGCAAGCGGCAACATCGGCAAA
GGCGATGCCGCCAACATCAACGACATCACGCTTGAATCGGCGCTCTCGACCATCATGGACTGCGAGGATTCGGTCGCCTG
TGTGGATGCCGAAGACAAGGTTAGCGCCTATGCCAACTGGCTAGGCCTGATGAAGCGCGACCTTAGTGAAGAGGTCAGCA
AGGGCGGCAAGACCTTTACCCGCGTATTGAACGACGACCTGTCCTACACCACCCCCACCGGCGAGGCGTCGAAGCTCAAG
GGGCGTTCTCTCCTGTTGGTGCGCAATGTCGGCCACCTGATGACAAACCCGGCCATCCTGGACAGTGCGGGCCGCGAGGC
GGGCGAAGGCCTGATGGATGCGATGATCACTGTCATGGTGGCCATGCATGACCTAAAATCCGAAGGCGGCAACTCGCTGC
ATGGGTCGGTCTATGTGGTGAAACCTAAGATGCACGGTCCCGAAGAGGTCGCCTTTGCGGTAAAGATATTTGATCACGTT
GAAGACGCACTGGGCCTGCCGCGCAACACGGTCAAGATCGGCATCATGGACGAGGAACGCCGCACCTCGGCCAACCTCAA
GGAATGCATCCGTGCCGCAAAATCGCGGGTGGCCTTCATCAACACCGGGTTCCTCGATCGCACCGGCGATGAGATCCACA
CCTCGATGGAAGCAGGCGCAATGCTGCCCAAGGGCGAGATGAAATCGACCGCGTGGATTGCCTCTTATGAGGATCGCAAC
GTCGATATCGGTCTGGCCTGTGGTCTGCAGGGGCGTGCCCAGATTGGCAAGGGCATGTGGGCGATGCCTGACCGTATGGG
CGAGATGCTGGACGCAAAGATCGGCCACCCGAAATCCGGCGCAACCTGCGCCTGGGTGCCCTCGCCGACCGCTGCGACCC
TGCATGCCACCCATTATCACAAGGTGGATGTCCTGAGCCGCCAGAACGAGCTCAAGGCTGAGGGCGCGCGGGGCACATTG
GATGATCTGCTCACGATCCCGGTAATGGCAGGCCAGAACCTCTCGGACGAGGCCATTACGCGTGAAATCGAGAACAACGC
TCAAGGCATTCTCGGATATGTGGTGCGCTGGGTAGATCAGGGTGTGGGCTGCTCCAAAGTGCCAGACATCAATGATGTGG
GGCTGATGGAAGACCGGGCGACCTGCCGGATCTCTAGTCAGGCCTTGGCGAACTGGCTGCATCATGGCGTTGTCTCCGAA
CAGCAAGTTATGGCCGCGATGCAGAAAATGGCCGCCGTTGTGGATGGCCAAAACGCTGCCGATCCTTCTTATCGCCCGAT
GGCTCCCGGGTTCGACGGCATCGCCTTTCAGGCCGCCTGCGATCTGGTGTTCAAGGGCCGCATTCAGCCCTCCGGCTATA
CGGAGCCGGTGCTGCATGCCCGCCGTCTGGAACTGAAGGCTCAGGGCTAA

Protein sequence :
MSRIERNGLQVASELVAFVEDQALPGTGVSKEAFWAGLAGLVEGMGDENRALLAKRAEIQGQIDAWHLEHRGQPHDAAAY
KDFLTEIGYLVPEGPDFEVETQNVDPEIAHVPGPQLVVPITNARFALNAANARWGSLYDALYGTDAMGDLPSGSGYDAER
GARVIAWGRQFLDETFPLTAGSWSDVAALQVQDGALAPALKDATQFAGYAGDATSPRRILLKNNGLHAILEIDASGNIGK
GDAANINDITLESALSTIMDCEDSVACVDAEDKVSAYANWLGLMKRDLSEEVSKGGKTFTRVLNDDLSYTTPTGEASKLK
GRSLLLVRNVGHLMTNPAILDSAGREAGEGLMDAMITVMVAMHDLKSEGGNSLHGSVYVVKPKMHGPEEVAFAVKIFDHV
EDALGLPRNTVKIGIMDEERRTSANLKECIRAAKSRVAFINTGFLDRTGDEIHTSMEAGAMLPKGEMKSTAWIASYEDRN
VDIGLACGLQGRAQIGKGMWAMPDRMGEMLDAKIGHPKSGATCAWVPSPTAATLHATHYHKVDVLSRQNELKAEGARGTL
DDLLTIPVMAGQNLSDEAITREIENNAQGILGYVVRWVDQGVGCSKVPDINDVGLMEDRATCRISSQALANWLHHGVVSE
QQVMAAMQKMAAVVDGQNAADPSYRPMAPGFDGIAFQAACDLVFKGRIQPSGYTEPVLHARRLELKAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 57