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Name : Sala_1516 (Sala_1516) Accession : YP_616562.1 Strain : Sphingopyxis alaskensis RB2256 Genome accession: NC_008048 Putative virulence/resistance : Unknown Product : cytochrome c assembly protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1582264 - 1584234 bp Length : 1971 bp Strand : - Note : - DNA sequence : ATGATCGCCGAACTCGGCCTTGCCCTGCTGTGGATCGCGGCGGCGCTCGCGTGCCTGTCACTCGTCGCGGGAACCTTGTT CCTGCGCGGCGGACCGGGGGATCTGGCGGCGCTGGTGCGACCGGCGAGCGTCGCGCAGGGTGTGCTTACCACGGCCGCCT TTGGTCTGCTCATCGCGCTGTTCGTGCGGTCCGACATGTCGGTCGAGCTGGTCGCGCGCAACAGCAACAGTTTGAAGCCG ATGATCTTCAAGATTGCCGGGACATGGGGCAATCACGAAGGGTCGATGCTGCTGTGGCTGATGATCCTGTCGCTGTCGGG GGCGCTGATCGCGCTTTTCGAAAAGCGGCTGCGCGAGGATACGCTGATTGCGACGCTGGCGGCGCAGGCGGCGCTGAGCC TCGGCTTTTTCGCCTTTCTGCTTTTCTCTTCCAATCCCTTCAAGCGGTTGCCGGTCGCGCCTCCCGACGGGCAGGGCCTG AACCCGCTGCTTCAGGACATCGGTTTGGCCTTTCACCCGCCGACGCTTTACGTCGGCTATGTCGGGCTGTCGGTCGCGTT CAGCTTTGCCGTGGGCGCGCTGATCACGCGCGAGATCGGTCCGGCCTTCGCGCGCGCGATGCGGCCGTGGGTGCTGGGAA GCTGGATCTTCCTGACCCTGGGCATCACCGCGGGGAGTTACTGGGCCTATTATGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGATCCGGTCGAGAATGTCTCGCTCGTGCCCTGGCTCGCGGGCGCGGCGCTGCTCCATTCGGTCGCGGTCACGGCGAC GCGTAACGCGCTGCGCGCGTGGACGGTGATGCTCGCGGTGATCGGCTTTTCGATGTCGATGGTCGGCACCTTCATCGTGC GGTCGGGTCTGCTCACGAGCGTCCACAGCTTTGCCGTCGATCCCGAGCGCGGCACCTTTCTGCTCGTGCTGATGGCGATC TATATCGGCGGCGCGCTGACCCTTTTTGCCCTGCGCGCCGGGTCGGTTGCCGAAGGAAAGAAATTTGCGCTGCTGAGCCG CGAAGGCTCGCTCGTGATCAACAACCTGCTGCTTACGACGATCCTCGCGCTCGTCCTTCTCGGCACGCTCTATCCGATCG TCGCCGAGGCGATGGGCGAGAAGATTTCCGTCGGTCCGCCCTATTATAACAAGGTGGCGGGGCCGCTCGCGCTGATCCTC TGCCTCGTGATGGTTGCCGGGCCGTTGCTCAGCTGGCGCAAGGACGACGGCAAACGGCTGTGGTCGCGCCTGCCTGTCGC GATCTTCGCCGGGGCGGCGATACTGTTCGCGTTGATCCTGTTCGGCGGCAAGGTCGGTATCCTGCCGCTGCTCGGCATGA CCGTCGCGGGCATCGTCGCGGTCGCGAGCCTGGCGCCCTTGTGGGGCCGCAACCTCCGCCGCGTGCCTTTGCCGACCTGG GGCATGGTCGTCGCGCATTTCGGCGTCGGTGTGTGCCTCGCCGGCATGGGAGCAGAGAGCGCGTTCATCAAGGAAAGGCT GGTCGCCGCCGCGCCCGGCGAGACGATCCGCATCGCCGATTTTTCGGTGAAGTTCGTCGGCGTGAAGCCCCTGGCCGGGC CGAACTATACTGCCATTGAGGGCGCGCTGGTCGCGACCACCCCATCGGGCAGCAGCTTTACGATGAAACCCGAAGCGCGA ACCTTTCCGGGGCTGATGGGCACGGCACCGACCGAAACGAACGAGGCGGCATTGCTGACGCGGCCGGGCGGGCAGCTTTA TGCAGTGCTCGGCCAGCCGGTGACGGGCGAGGATGGCCGCGCCGACCGCTACCAGATTCGCCTGTGGTGGAAACCGTTGG TGTGGTGGATATGGCTTGGCGGCGGCCTGATCGCGCTCGGCGCCACTTTGTCGCTGCTTGGACGCGCGCAGCTGCTCGCC ATGTGGCGCGCGCGCCGGCACCGCAAATCACAGGAGCGTTTTGCGCCATGA Protein sequence : MIAELGLALLWIAAALACLSLVAGTLFLRGGPGDLAALVRPASVAQGVLTTAAFGLLIALFVRSDMSVELVARNSNSLKP MIFKIAGTWGNHEGSMLLWLMILSLSGALIALFEKRLREDTLIATLAAQAALSLGFFAFLLFSSNPFKRLPVAPPDGQGL NPLLQDIGLAFHPPTLYVGYVGLSVAFSFAVGALITREIGPAFARAMRPWVLGSWIFLTLGITAGSYWAYYELGWGGWWF WDPVENVSLVPWLAGAALLHSVAVTATRNALRAWTVMLAVIGFSMSMVGTFIVRSGLLTSVHSFAVDPERGTFLLVLMAI YIGGALTLFALRAGSVAEGKKFALLSREGSLVINNLLLTTILALVLLGTLYPIVAEAMGEKISVGPPYYNKVAGPLALIL CLVMVAGPLLSWRKDDGKRLWSRLPVAIFAGAAILFALILFGGKVGILPLLGMTVAGIVAVASLAPLWGRNLRRVPLPTW GMVVAHFGVGVCLAGMGAESAFIKERLVAAAPGETIRIADFSVKFVGVKPLAGPNYTAIEGALVATTPSGSSFTMKPEAR TFPGLMGTAPTETNEAALLTRPGGQLYAVLGQPVTGEDGRADRYQIRLWWKPLVWWIWLGGGLIALGATLSLLGRAQLLA MWRARRHRKSQERFAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-76 | 42 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-74 | 42 |
