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Name : rnhA (HPAG1_0646) Accession : YP_627387.1 Strain : Helicobacter pylori HPAG1 Genome accession: NC_008086 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 674125 - 674556 bp Length : 432 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCAAGAAATTGAAATTTTTTGCGATGGCTCTTCTTTAGGCAATCCCGGGCCAGGCGGTTATGCGGCGATTTTACGCTA TAAAGATAAAGAAAAAACCATCAGTGGAGGCGAAGAATTCACCACGAATAACCGCATGGAATTAAGAGCACTCAATGAAG CGTTAAAAATTTTGAAACGCCCATGCCGTATCACGCTTTATAGCGATTCGCAATACGTGTGCCAAGCGATCAATGTGTGG CTGGTTAACTGGCAAAAAAAGAATTTTTCTAAAGTTAAAAATGTGGATTTATGGAAAGAATTTTTAAAAGTCTCTAAAGG GCATTTGATTATGGCTGTTTGGATCAAGGGGCATAACGGGCATGCTGAGAATGAACGATGCGATAGCCTTGCTAAATTAG AGGCGCAAAAACGCACTAAAACGATCACTTAA Protein sequence : MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGEEFTTNNRMELRALNEALKILKRPCRITLYSDSQYVCQAINVW LVNWQKKNFSKVKNVDLWKEFLKVSKGHLIMAVWIKGHNGHAENERCDSLAKLEAQKRTKTIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 4e-28 | 53 |
