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Name : clpC (MXAN_4832) Accession : YP_632993.1 Strain : Myxococcus xanthus DK 1622 Genome accession: NC_008095 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6046572 - 6049226 bp Length : 2655 bp Strand : - Note : identified by similarity to GB:AAC44446.1; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724 DNA sequence : ATGGCCAATGTCTGCGACCTCTGCCACCAGCGCCCGGCGACCACCCGAGTCACCCGCGTCATGGGGAACCGGCGGACCAC CGAGTCCCTGTGTGACGTCTGTAGCAGCCAGCGCTCGCGCTTCGGCCGCATGGGCCTGGGCACGTCGCTCTTCGACCAGT TCTTCAGTGACTTCGGAGACGAGGACTTCGGGGGGCTGTCGCGTTCACTCCAGCAGCCGGTGGAGCGCTACGACATCACC GAGGCCTTCTCCGATGAGACGCGGCGCGTATTGGAAGCGGCCTTCGAGGCGGCGCGAAGCGCGGGGGCGGCTTCCATCGA CACGGAGCACCTGCTGGTGGCGCTCGCGAAGGACCCGCTGGGCCGGACCGCGCTCAGCCGCATGAAGCTGGACCCGGCCC GCGTCGCCGAGCGCGCCGAGTCCGAGATGCGCCGTGGGAAGCGCCCCATGGAGCGTCCCGAGCTGTCGCCGCATGCGAAG CGCGCCCTGGAACTCGCGTACCAGGAGGCCTACGAGCTGGGACATTCCTATGTGGGGCCCGAACACGTGCTGCTGGGGTT GCTGCACGAAGGGGAAGGCCTGGCGTCGGAGATTCTGCGCGAGCAAGGGGCCCAGCACGGCAAGGCGCGCGCGGCCGTCG CGGAAGCGCTGGCACCTTCATCCGAGGCACGCCGGTCGCCCACGCCCACGCTGGACGAGTACTGCCGCGACCTGACGAGC CTGGCCTCGGAAGGGAAGCTGGACCCGGTGGTGGGGCGGGCCAACGAAATCGAGACCACGCTCGAAATCCTCTCGCGTCG TACGAAGAACAACCCCGTGCTCATTGGTGAGCCGGGCGTGGGCAAGACGGCCATCGTGGAGGGCATTGCCCAGCGCATCA TCTCCGCCGCGGTCCCGGACACGCTGCGCGACAAACGCGTGCTGCAACTGGACCTGTCCGGCCTGCTCGCGGGCAGCAAG TACCGCGGTGAGTTCGAGGAGCGGCTGAAGAAGGTCATGGACGAGGTGAAGTCGCACAGCGAGGACATCGTCCTCTTCAT CGACGAGATTCACACCATCGTCGGGGCGGGCGCGGCGGAGGGGGCCATGGATGCGGGCAACATGCTCAAGCCATCCCTGG CGCGCGGCGAGCTGCACGTCATCGGCGCGACGACGTTGGATGAATACCGCAAGCGCATCGAGAAGGATGCTGCGCTCGAA CGCCGCTTCCAGCCCGTGGTCGTCCCGGAGCCGACGGCCGAGCAGGCCATTGAGATTCTGCGAGGCCTCAAGGACCGCTA CGAGTCCCACCACCGCGTGCGCATCGCGGACGAGGCGCTGGTGGCGGCGGTGGAGCTGTCGGACCGTTACGTCACAGGGC GCTTCCTGCCGGACAAGGCCATCGACCTGGTGGACCAGGCGGCGGCCCGCGTGCGCTTGCGGCTCACGCTGCCACCGGAG CGACTGGTGAATGCCGAGCATGAGGTGGTGAAGGTGAAGCGCTCGCTCGACGAGGCTCGCGGCCGGAAGGCGGGGCCGCG CATCCAGGAGCTGGAGTCGAAGCTGAACGCCGCCGAGCGCGAGGTCCAGAGCGCGCAGAAGGAGCGCCGCACGCAGAAGT CCGGTGAGACGCCGGAGGTCCGCGCCGAGGACGTGGCGGAGGTGCTGTCGCGCATGACGGGCATCCCCGTGACGCAGATG ACGGAGGACGAGCGCAAGAAGCTGCTGGAGCTGGAGTCGCGGCTGCACGAGCGCGTCATCGGTCAGGACGAGGCCATCCG CGTGTTGTCCCAGGCCATCCGGCGGGCGAGGGCGGGGCTCAAGGACGAGTCGCGCCCCATCGGCTCCTTCCTCTTCCTGG GCCCCACGGGCGTGGGCAAGACGGAGTTGGCGAAGACGCTGGCGGAGCTGCTCTTCGGTGACGAGAAGGCGCTCATCCGC TTCGACATGAGTGAGTACATGGAGAAGCACACCGTGAGCCGGCTGGTGGGCGCGCCGCCGGGCTATGTCGGCTACGAGGA GGGCGGGCAGCTCACCGAGGCCGTGCGGCGGCGGCCCTACTCCGTGCTCCTCTTCGACGAGGTGGAGAAGGCCCACCCCG ACGTGTTCCACATGCTGCTCCAGGTGCTGGATGACGGGCGGCTCACGGACGCGCAGGGCACGGTGGTGAACTTCAAGAAC ACCGTCATCATCGGCACCAGCAACCTGGGCTCGCACCTCATCCAGGAGTCCACCGCGCGCAAGGAACCGCAGGAGCGCAT GCGGGAGCGCGTCATGGGCGTGCTCAAGGGGCACTTCCCGCCCGAGTTCCTCAACCGCATCGACGAGACGGTGGTCTTCG AGCCGCTCAACCGCGCGCAGCTGCGCGCCATCGTGGACCTGATGCTGGAGAAGACGCGCCGCCTGCTGCACGGCCAGGGC ATTGACCTGGAGGTGACGCCCGCGGCGCTGGAAGCGCTGGTGGACAAGGGATGGGACCCAACCTTCGGCGCGCGTCCGCT GCGGCGTGAAATCCAGCGCGCCATCGAGGCGCCACTCGCGGAGAAGCTCATCTCGGGCGACATCCATGAGAACAGCCGCG TGAGAGCGGACTTCAAGGACGGAAAATTCCGGTTCGACGAAGTGGAGGCCGCTGAGGCGGAAGTCGCGCAGGCTGAAGCG AGTGCCGTTCACTGA Protein sequence : MANVCDLCHQRPATTRVTRVMGNRRTTESLCDVCSSQRSRFGRMGLGTSLFDQFFSDFGDEDFGGLSRSLQQPVERYDIT EAFSDETRRVLEAAFEAARSAGAASIDTEHLLVALAKDPLGRTALSRMKLDPARVAERAESEMRRGKRPMERPELSPHAK RALELAYQEAYELGHSYVGPEHVLLGLLHEGEGLASEILREQGAQHGKARAAVAEALAPSSEARRSPTPTLDEYCRDLTS LASEGKLDPVVGRANEIETTLEILSRRTKNNPVLIGEPGVGKTAIVEGIAQRIISAAVPDTLRDKRVLQLDLSGLLAGSK YRGEFEERLKKVMDEVKSHSEDIVLFIDEIHTIVGAGAAEGAMDAGNMLKPSLARGELHVIGATTLDEYRKRIEKDAALE RRFQPVVVPEPTAEQAIEILRGLKDRYESHHRVRIADEALVAAVELSDRYVTGRFLPDKAIDLVDQAAARVRLRLTLPPE RLVNAEHEVVKVKRSLDEARGRKAGPRIQELESKLNAAEREVQSAQKERRTQKSGETPEVRAEDVAEVLSRMTGIPVTQM TEDERKKLLELESRLHERVIGQDEAIRVLSQAIRRARAGLKDESRPIGSFLFLGPTGVGKTELAKTLAELLFGDEKALIR FDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVLLFDEVEKAHPDVFHMLLQVLDDGRLTDAQGTVVNFKN TVIIGTSNLGSHLIQESTARKEPQERMRERVMGVLKGHFPPEFLNRIDETVVFEPLNRAQLRAIVDLMLEKTRRLLHGQG IDLEVTPAALEALVDKGWDPTFGARPLRREIQRAIEAPLAEKLISGDIHENSRVRADFKDGKFRFDEVEAAEAEVAQAEA SAVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-171 | 50 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-97 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_632993.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 8e-177 | 52 |
| clpC | YP_632993.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 4e-143 | 49 |
