Gene Information

Name : YPN_1721 (YPN_1721)
Accession : YP_647650.1
Strain : Yersinia pestis Nepal516
Genome accession: NC_008149
Putative virulence/resistance : Virulence
Product : toxin transport protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 1936616 - 1938754 bp
Length : 2139 bp
Strand : +
Note : -

DNA sequence : 
ATGACGGAGTCTTATTCAACTCTGGCCGCCGAGGGCACCAAGGTTATTCAGCCACTGGAGGCGTTGGCGTGTGCTGCTAC
CTGTTTTGATTTAACCATCGAAGCTTCGCAATTGGCACACCAACTAGGCTTAGCTCCCGATGAGATAGACAGTATTGCCT
TGTGCCGTTGTGCTGCTTGGATAGGGTTACGAGCGCGGAAAGTTAATCAGTCTTTTGAACGTGTGGGAAAGCTGGTATTA
CCCGTTTTATTCAGTGATGGTGCTCAGTGGTATGTTTTGCTGTCGCTGACCGCGCAGGAGGCCACTGTCTATTTTGCAGG
CAGCGACCAGACGCGGAAAATAAGTCCAGAAGTCCTTGCGAAATTGTGGCGCAATGAGGTGATTTTGCTGGCGAAAGCGG
AACCGATAACGGCCAAAAAGCAGTTTTTCGGTTTTAGCTGGTTTATTCCGGTGGTGATGAAGTCCCGGCATCAGCTACGT
AACATTATTCTTATCTCATTACTGCTACAAGCCATTTTACTCGTCACGCCAATGCTATTTGAAACCGTTATCGATAAAGT
GTTGGTAAGCCGCGGGGTCGATAGTTTGGTGGTTCTAGGTGGAGCCATGGTGGCACTGGCGATTACTGAACCGGGGTATA
CCTTATTACGTAGCTGGCTGTTTGCGCATTTGTCCAGCAGGGTGGGGGCTGAACTCAATACACAGTTATATCGGCATCTT
CTGGGGCTGCCACTGGGGTATTTTACCGGCCAACAGACAGGGCAAACTATCGCCAAGATGCGAGAAATGGAGCAAATTCG
CAGCTTCCTTACGGGCTCAGCCCTGACTATGGTGTTGGATCTGTTTTTTGTCGTCACCTTTATTGCAGTGATGTTTCGCT
ACAGTGGTCAATTGACGGGGATCGTATTGATTTCCCTGCTTTGTTATCTGCTATTTTGGTCGGCAGTTGGGGGGCGGTTA
CGCAAGCGAGTGGCGCAGCAATACGAAACCAGTGCGCAAGCAACCTCGTTCCTGACCGAGGCGGTCAGCGGGGGGGAAAC
CATCAAAACCTCGGCAACCGAAAGTCAGTTTAACCGGCGTTGGCGTCAAGTATTAGCACGCTATGTCCGGGCCTCTTTTG
GCAGTTCGCAGGCAGGGAACTTGGCAGGCCAAGGGATCTCGCTCATTAATAAAATAACGTCAGCAATTCTGTTGTGGTTT
GGCGTGACCCTCGTATTGGCTGGAAAACTCAGCCCAGGTGAACTGGTGGCGTTTAATATGTTTGCCGGTTACGTTACCCA
ACCTATATTACGATTGGCTCAGGCATGGCAAGACTTCCAACATACGCAGATTGCGCTGGAGCGGATTGGCACCATTCTGG
ATAGCCCCACCGAACCCGGAAGTGCCGGGCTGGTTGCCAACTGTAAACGGGCAGGGAGCTTAAGTTTTAAGCAAGTGCGC
TTCCGTTATCGCCCTGATACCGCAGAAGTTTTACAAAATCTCAATCTGGAGATTGCCGGTGGAGAATTTATCGGCATTAC
CGGGCCATCGGGGTGCGGTAAATCGACACTGACCAAGCTAATGCAACGCTTATATACGCCACAACATGGGCAGATTCTGG
TCGATGGGCAGGATTTGGCGATTACTGACCCCACCACGCTGCGCCGTCAAATGAGTGTGGTATTGCAGGAGAGCGTTCTA
TTTTCGGGCAGCATTCGGGACAATATTTGTCAATGTCGGCCCAATGCAGATGAGGCTCATGTGATACATATTGCCCGGTT
GGCCGGGGCGCATGATTTTATTATAGCGTTGCCGCAGGGTTATCAAACTCAGGTCGGTGAAAAGGGGGGGCTGCTTTCTG
GCGGGCAATGTCAGCGGATTGCACTGGCAAGGGCGCTGATGGCTGATCCCAAGATTCTTATCCTTGATGAAGCAACCAGT
GCGTTGGACTATGAATCGGAGGCGGCGATTATGCGCCAATTACCGGAAATCACCCGTAACCGCACGGTTATCTGCATTGC
ACACCGTTTGAATACACTACGTCAGTGCCACCGCATTTTGTTACTAAAAGATGGGCAAATTGCGGAGCAAGGTAGTCATG
AAGTCTTGGTAGCAAGTGGTGGGAATTACGCTCGTCTGTGGCAACAGCAGACAGAGTAG

Protein sequence : 
MTESYSTLAAEGTKVIQPLEALACAATCFDLTIEASQLAHQLGLAPDEIDSIALCRCAAWIGLRARKVNQSFERVGKLVL
PVLFSDGAQWYVLLSLTAQEATVYFAGSDQTRKISPEVLAKLWRNEVILLAKAEPITAKKQFFGFSWFIPVVMKSRHQLR
NIILISLLLQAILLVTPMLFETVIDKVLVSRGVDSLVVLGGAMVALAITEPGYTLLRSWLFAHLSSRVGAELNTQLYRHL
LGLPLGYFTGQQTGQTIAKMREMEQIRSFLTGSALTMVLDLFFVVTFIAVMFRYSGQLTGIVLISLLCYLLFWSAVGGRL
RKRVAQQYETSAQATSFLTEAVSGGETIKTSATESQFNRRWRQVLARYVRASFGSSQAGNLAGQGISLINKITSAILLWF
GVTLVLAGKLSPGELVAFNMFAGYVTQPILRLAQAWQDFQHTQIALERIGTILDSPTEPGSAGLVANCKRAGSLSFKQVR
FRYRPDTAEVLQNLNLEIAGGEFIGITGPSGCGKSTLTKLMQRLYTPQHGQILVDGQDLAITDPTTLRRQMSVVLQESVL
FSGSIRDNICQCRPNADEAHVIHIARLAGAHDFIIALPQGYQTQVGEKGGLLSGGQCQRIALARALMADPKILILDEATS
ALDYESEAAIMRQLPEITRNRTVICIAHRLNTLRQCHRILLLKDGQIAEQGSHEVLVASGGNYARLWQQQTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 2e-138 44
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 1e-138 44
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 1e-138 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPN_1721 YP_647650.1 toxin transport protein VFG0841 Protein 2e-135 45
YPN_1721 YP_647650.1 toxin transport protein VFG1269 Protein 6e-137 45
YPN_1721 YP_647650.1 toxin transport protein VFG0907 Protein 8e-139 44
YPN_1721 YP_647650.1 toxin transport protein VFG1557 Protein 7e-139 44
YPN_1721 YP_647650.1 toxin transport protein VFG1501 Protein 7e-139 44