|
Name : YPN_2208 (YPN_2208) Accession : YP_648136.1 Strain : Yersinia pestis Nepal516 Genome accession: NC_008149 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2494251 - 2496221 bp Length : 1971 bp Strand : - Note : - DNA sequence : ATGATCCCTGAAATTGGCAGTTTTTTATTATGTTTGGCGTTGGCGATTTCACTGCTGCTGAGTCTGTATCCACAATGGGG AGCCGCGCGTCAGGATGCCCGTATGATGGCGGTTGGCAGGCCACTGACTTATGGCATGTTTGCCGCGATCACGTTGTCAT TTATCTGTCTGATATATGCATTTGTGGTAAATGATTTTACCGTCTCCTATGTCGCGGCGAATTCCAACTCATATTTGCCG ATTTATTACCGTATTGCCGCGAGTTGGGGAGCGCACGAAGGCTCCTTATTATTATGGGTATTGCTGCTCAGTTGTTGGTC ATTGGCGGTAGCGCTGTTTAGCCGTTCGATGCCAGAGGATGCGGTGGCGCGGGTGTTATCCGTGCTGGGAATGATTACCG GCGGTTTTCTGCTATTTATTATTCTGACGTCTAACCCGTTCTCTCGCACATTACCTGATTTTCCTATTGATGGCCGCGAT CTGAACCCGCTACTACAAGATGTTGGGTTGATTTTCCATCCCCCGCTGCTCTACATGGGGTATGTCGGTTTCTCCGTCGC GTTTGCTTTTGCAATTGCATCATTAATGGCCGGTAGGCTCGACAGTGCCTGGGCGCGTTGGTCACGTCCATGGACTCAGG CCGCATGGATTTTCCTAACGCTTGGCATCGTACTTGGCTCAGCGTGGGCTTATTATGAATTGGGGTGGGGCGGCTGGTGG TTCTGGGACCCGGTCGAAAATGCCTCCTTTATGCCGTGGCTGGCAGGTACCGCACTGATTCACTCACTGGCTGTCACGGA GAAGCGCGGTACTTTCAAAGCGTGGACGGTATTGTTGGCGATCACCGCGTTCTCCTTGTGTTTGATGGGGACATTCTTAG TCCGCTCAGGCGTGCTGGTTTCGGTGCACTCCTTTGCCTCTGATCCGGCCCGTGGCATGTTTATTCTGGCCTATCTGGTG ATTGTGATTGGCGGTTCCCTGCTGCTGTATGCGGTAAAAGGCGCGCAGGTGCGCAGCCGGACTCAGCATGAAGTCTTTTC CCGCGAGACTTTCCTGCTCGGCAACAATGTGTTGCTTATTGCCGCAATGCTCGTGGTGTTGCTGGGAACATTACTGCCAC TGGTTCACAAACAGTTGGGATTGGGCAGTATCTCCATTGGTGAACCGTTCTTTAATACGATGTTCACTTGGTTAATGGCT CCGATGGCATTGCTCATGGGGATAGGGCCGCTCGTGCGTTGGCGTCGTGATGAACCGAGCAAACTGTGGAAGCGGTTGAG TGTGGCTCTGGTGGTCACTCTGCTGTTATCGATATCCGTACCGTGGCTGCTGCAAGATAGTGTCGCCGGTATGACGGTCG TCGGGTTGATGATGGCCATTTGGGTGATCATCCTGACATTAATGGAATTGCACGAACGGGCCACCCATCGTTATGGCTTC TGGCGTGGGTTGACTCACCTTTCCCGTAGCCACTGGGGCATGGTGTTGGGGCATCTCGGGGTGGCGGTTACGGTAATTGG GATTGCGTTTAGCCAGAATTACAGTGTCGAACGCGATGTGCGCATGAAGGCCGGTGATAGTATCGATATCCATGATTATC ACTTCACTTTTCGCGATGTCCACGATATCAAAGGGCCTAACTATACCGGCGGCGTTGGCATTATTGATGTCACCCGTAAT GGTAAATTGGAGGCCACATTACATGCAGAAAAACGCTATTACAGTGTCGCCCGCTCAATGATGACTGAAGCAGCCATTGA TGGGGGGCTGACCCGCGATCTTTATGCCGCCTTGGGTGAAGAGCTGGGCGATGGCTCATGGGCGGTCCGCTTGTATTACA AACCTTTTGTGCGTTGGATATGGTTTGGCGGGATCTTTATGGCCGTCGGCGGCATCTTCTGTATGCTCGATCCGCGCTAT CGGATGAGTAAAAAGCTAAAACGCGGTGCGATACCGGAGGCAGAGTCATGA Protein sequence : MIPEIGSFLLCLALAISLLLSLYPQWGAARQDARMMAVGRPLTYGMFAAITLSFICLIYAFVVNDFTVSYVAANSNSYLP IYYRIAASWGAHEGSLLLWVLLLSCWSLAVALFSRSMPEDAVARVLSVLGMITGGFLLFIILTSNPFSRTLPDFPIDGRD LNPLLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMAGRLDSAWARWSRPWTQAAWIFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLMGTFLVRSGVLVSVHSFASDPARGMFILAYLV IVIGGSLLLYAVKGAQVRSRTQHEVFSRETFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMA PMALLMGIGPLVRWRRDEPSKLWKRLSVALVVTLLLSISVPWLLQDSVAGMTVVGLMMAIWVIILTLMELHERATHRYGF WRGLTHLSRSHWGMVLGHLGVAVTVIGIAFSQNYSVERDVRMKAGDSIDIHDYHFTFRDVHDIKGPNYTGGVGIIDVTRN GKLEATLHAEKRYYSVARSMMTEAAIDGGLTRDLYAALGEELGDGSWAVRLYYKPFVRWIWFGGIFMAVGGIFCMLDPRY RMSKKLKRGAIPEAES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-180 | 71 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-131 | 53 |
