Gene Information

Name : YPA_1608 (YPA_1608)
Accession : YP_651519.1
Strain : Yersinia pestis Antiqua
Genome accession: NC_008150
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 1796339 - 1798123 bp
Length : 1785 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAATCATGTTCATTCCGCGCTGATATGTGCATCCAGACTGATTCGGTTGGCCGGGTTAAATCCAATGGATATCGA
GACATTTAGCCAAAAGGTCGCCATAGACACCTCAGTAAAAACAACGCTAGCGTCTCTTCAGCGTTATATCGTTCAATTTT
CACAAACAGCTTCTGTCCGTTTTAAAATACGTAAGCAAGCATTGGAAAAAATAAGGCAGGAGCAGTTACCGCTGGCATTT
CGTGACCGTCAGGGGAATTTTATCTTGCTGGCGCGGATGAATGAACAACAAGTGTTATTACAGTACGCTGATGATAAAAA
ACCACAAATGTTAAGTTATCAATCACTTGCTGACATGTGGGGTGGAATGATCTTATGCTGTAGTCATTCGCGCTTTGATA
TTCGCTGGTTTATCCCGCCACTACGTCGCCATCGTAAGCCATTAATGCAAGTCCTATTGTTATCATTATTGCTGCAATTC
CTAGCGTTGATCTCCCCTCTCTTTTTTCAAGTTATCATGGACAAAGTACTCGTTCATCATGCATTAACCACACTGGAAGT
GCTAATCTTCATCTTAGTCATTGTCGGTGTGTATGAGGTTATATTAAAAGGCTTGCGAGAATATATTTTCACGCATACGA
CAACACGAGTGGATATATTATTAGGCGGGAAGTTGTTTCAACATTTAATCAGGTTGCCGTTAAGTTACTTTAAACAACGT
CATGTCGGTAATATTGTTGCCAGAGTCCGTGAGTTAGATAATATCCGTGATTTCATCACGGGTTCGGCCCTGACATTATG
TGTTGATGTGGTTTTTACCCTCGTGTTGTTTATTGTTATGTGGTGTATATCCCCGTTATTAACCTTAATAATACTGAGCA
CGTTGCCTTTTTATCTGTTATTGGCCGTGATGACCACTCGGCCGTTGCAAAAAAAAGTAGAAGCTCTCTGTGGTTTTGCC
GCGCAAAACGGCGCGTTTTTGACTGAAACGGTGTCTGGGGTGGAAACCGTAAAAAGTTTGGCGCTGGAGCCACGGATGCG
CCAGCGCTGGGAAAGCCAAACTCGTGATTTTGCTCAGGCTAATTTTCAGGTACAAAATTTGCAAAATCTCAGTAGCCAAG
CGGCTCAACTCTTGCAAAAGGTGGCTGGCGCACTGGTGATCGTGATAGGTGCGTATCACGTTATGTCTGTACAGCTCAGT
ATTGGTCAGTTGATTGCATTTAATATGTTGGCACTACAGGCATTAATGCCGATGAGTAAACTGGTTGATTTATGGCAGCA
GAGCATCCGTGCTCAGGTTGGGCTGAAATTAATATCAGATATTCTAAGCTTGCCGGTTGAACCGGAGGCAGATCCGGCGG
CCCCGCACCCTGCGATTAGCGGCAATATCCTACTAAAAAATGTGGCCTTCCGTTATCGCCCCGATCTTGATCCTGTCTTA
CATGATTTAAACTTATCTATCCGCGCGGGTGAACATATCGGGTTGGTGGGGCCGTCAGGATCGGGGAAAAGCACCGTGGC
CCGGTTATTACAACGGCTCTATAACACCGAACAAGGGGTCATTACGATAGATGGTTATCCGATCAACCATTTATCACCAG
AATATTTACGGCGACAAGTGGGGGTGGTGATGCAGGAAAGCTATCTGTTTAACCGCACCGTGCGAGAAAATATTGCCCAT
TCACGGCCAACAGCCACCTTGACCGAGGTGGTCAATGCCGCCAGTTTAGCGGGTGCTAACGCCTTTATTTTGGCGCTACG
CGAATCCCCGGATCTTAATTTTTGA

Protein sequence :
MENHVHSALICASRLIRLAGLNPMDIETFSQKVAIDTSVKTTLASLQRYIVQFSQTASVRFKIRKQALEKIRQEQLPLAF
RDRQGNFILLARMNEQQVLLQYADDKKPQMLSYQSLADMWGGMILCCSHSRFDIRWFIPPLRRHRKPLMQVLLLSLLLQF
LALISPLFFQVIMDKVLVHHALTTLEVLIFILVIVGVYEVILKGLREYIFTHTTTRVDILLGGKLFQHLIRLPLSYFKQR
HVGNIVARVRELDNIRDFITGSALTLCVDVVFTLVLFIVMWCISPLLTLIILSTLPFYLLLAVMTTRPLQKKVEALCGFA
AQNGAFLTETVSGVETVKSLALEPRMRQRWESQTRDFAQANFQVQNLQNLSSQAAQLLQKVAGALVIVIGAYHVMSVQLS
IGQLIAFNMLALQALMPMSKLVDLWQQSIRAQVGLKLISDILSLPVEPEADPAAPHPAISGNILLKNVAFRYRPDLDPVL
HDLNLSIRAGEHIGLVGPSGSGKSTVARLLQRLYNTEQGVITIDGYPINHLSPEYLRRQVGVVMQESYLFNRTVRENIAH
SRPTATLTEVVNAASLAGANAFILALRESPDLNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 7e-85 42
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 6e-85 42
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 6e-85 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPA_1608 YP_651519.1 hypothetical protein VFG0907 Protein 3e-85 42
YPA_1608 YP_651519.1 hypothetical protein VFG1557 Protein 3e-85 42
YPA_1608 YP_651519.1 hypothetical protein VFG1501 Protein 3e-85 42
YPA_1608 YP_651519.1 hypothetical protein VFG0841 Protein 6e-79 42
YPA_1608 YP_651519.1 hypothetical protein VFG1269 Protein 2e-87 41