Gene Information

Name : YPA_3400 (YPA_3400)
Accession : YP_653307.1
Strain : Yersinia pestis Antiqua
Genome accession: NC_008150
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 3791625 - 3792971 bp
Length : 1347 bp
Strand : +
Note : -

DNA sequence :
ATGCCAACCAAAAATCGAGTGATTTGGCGCGAAGGGCTGTTCATCAAACCGCAACATTTTCAACAACAGCAACGGCATAA
CGACTACCAGTTACAACGCCGGATTATCGCTCTGCAAGGGTATAGCTATGGTTTCAGTTCACTGATCCTGAATCAGGAGT
TATTGAAATTAGGGCGTATTGGCTTGACGGTCGCCAGTGGCAATATGGCTGATGGCACGGTGTTTGATATCCCTTATCAA
GACTATTCACCAAAGCCATTGGATGTACTGAATTGTAATGATGCGGCCAGCCGTGACATTTATCTGGCATTACCGATGCT
AAACGATGCCATTAATGAGGTGGCAGGCCAGCAGGGGCAAGCGCCGGGAACCCTTCGCTATCGTGAACATAGCGATGATG
TCCGCGATTTACATACCGAAGGGGGCGATGTCAGCCAGTTGGTACTGGCACAACTGGCACCGCGTTTGATGCAAGGCTCG
GAAGACCTCAGTGCTTACTCGGTCCTGCCGCTGTGTCGGGTCAAAGAGAAACGGCCTGACGGTTCGCTGATCTTGGATGA
AGAGTTCATTCCCACCTGCACCACGCTCAGTGTCTCCACGCAGTTAAAAGGCTTTATGGATGAAGTCGAAGGGACATTGG
TTGAACGCGCCCAACTACTGGCGAAACGTATTGGTTCTCCCGGTCAGCAGGGGATCGCGGATGTGGCTGAATTTATGATG
TTGCAGGTCTTTAACCGGACACAGCCGCTCTTTACCCATTTGGCACATCAGGCGATTCTGCATCCAGAAGCGTTTTACCA
TCAGTTGGTACAAACCTGCGGTGAACTGCGCACGTTTACCGATGAATCACGCTTAGCGGGCACCTTCCCGGTTTATAACC
ACGATAACTTGACCGACAGTTTTCAGCCGTTGTTTTTGGCGATGCGTCAGGCATTAAGCACCGTGCTCACACCGCGTGCC
ATCTCTATCCAGTTGCATATGCAGGCACACGGTATTCGCGTTGCGACCATTAATGATAGTGATCTATTGCGCAGTGCTGA
TTTTGTGCTGGCGGTTCGGGCGCAAATACCTCAAGAACAATTGCGTCGGCAGTTTGTTCAGCAAACCAAAATCACCTCAC
TTGAGAAAATACGCGATTTGGTCAGTGTCCAACTGCCCGGCGTCCCGTTGGTGGCACTGTCCGCCGCACCGCGCCAGCTC
CCTTACCACTCGGGATACACCTACTTCATGCTGGATCTGCAAAGCCCTGTATGGAAAGAAATCCAGCAAAGCAATGCGAT
TGCCTTCCACGTCTCGGGTGATTTCCCTGATCTGGACATGCAATTCTGGGCAATCAGGAGCAGCTAA

Protein sequence :
MPTKNRVIWREGLFIKPQHFQQQQRHNDYQLQRRIIALQGYSYGFSSLILNQELLKLGRIGLTVASGNMADGTVFDIPYQ
DYSPKPLDVLNCNDAASRDIYLALPMLNDAINEVAGQQGQAPGTLRYREHSDDVRDLHTEGGDVSQLVLAQLAPRLMQGS
EDLSAYSVLPLCRVKEKRPDGSLILDEEFIPTCTTLSVSTQLKGFMDEVEGTLVERAQLLAKRIGSPGQQGIADVAEFMM
LQVFNRTQPLFTHLAHQAILHPEAFYHQLVQTCGELRTFTDESRLAGTFPVYNHDNLTDSFQPLFLAMRQALSTVLTPRA
ISIQLHMQAHGIRVATINDSDLLRSADFVLAVRAQIPQEQLRRQFVQQTKITSLEKIRDLVSVQLPGVPLVALSAAPRQL
PYHSGYTYFMLDLQSPVWKEIQQSNAIAFHVSGDFPDLDMQFWAIRSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-109 52
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 1e-109 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPA_3400 YP_653307.1 hypothetical protein VFG2082 Protein 1e-106 49
YPA_3400 YP_653307.1 hypothetical protein VFG2065 Protein 2e-94 41