|
Name : rnhA (RD1_1351) Accession : YP_681679.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 1302630 - 1303082 bp Length : 453 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCCTGAGTTGTTCGCCTATACGGATGGTGCCTGTTCGGGCAACCCGGGCCCCGGCGGCTGGGGCGTTTTGCTGCAGGC CAAAGAGGGCGACAGGCTGGTCAAGGAACGCGCGCTCAAGGGCGGTGAGGCACATACCACCAACAACCGGATGGAGCTTT TGGCCGCCATCAACGCGCTGGAATCCCTCAGCCGCGCCAGCACGATCACCGTCGTGACCGACAGCAACTACGTCAAAAAT GGCATCACCGGCTGGATTCATGGCTGGAAGCGAAACGGCTGGAAAAATGCCGCCAAGAAACCCGTCGCGAACGCAGAACT CTGGCAAAGGCTGGATGAGGCCAACGCACGTCACGACGTCACGTGGAAATGGGTCAAGGGGCACGCCGGGCATGCGGAAA ACGAACGCGCGGACGAATTGGCGCGCGCGGGCATGGCCCCGTTCAAACCATGA Protein sequence : MPELFAYTDGACSGNPGPGGWGVLLQAKEGDRLVKERALKGGEAHTTNNRMELLAAINALESLSRASTITVVTDSNYVKN GITGWIHGWKRNGWKNAAKKPVANAELWQRLDEANARHDVTWKWVKGHAGHAENERADELARAGMAPFKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-37 | 59 |
