Gene Information

Name : gap (RD1_2880)
Accession : YP_683092.1
Strain : Roseobacter denitrificans OCh 114
Genome accession: NC_008209
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.12
Position : 2757540 - 2758547 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence :
ATGTCCCATCAGGTAGGTATCAACGGCTTTGGACGAATTGGGCGGGGTGTCCTGCGCGCATTGGTCGAAAACAGAATTTC
CGATGTGGAAGTTGTCGCCATCAACGACCTGTCCAGCCCTGAAACGCTGGCGCATCTGTTGAAATACGACAGTGTGCACG
GACGCTTTCAGGGGGATGTTGAAGTGCAGGGCGATGCGCTCATCGTCAATGGCAAGCCGATCCGGGTGAGTGCGTTGCGC
GACCCGGCGGAACTGCCGTGGGGCGACGTGGATGTCGCGATGGAATGCACGGGGTTTTTCACGGCGCGCGATAAGGCCGC
GTTGCATCTCAAGAACGGCTCTGGCCGGGTTCTGATCTCGGCACCCGGGGCGGATGCGGATCGCACCGTTGTGTTTGGCG
TCAATGATCACGAATTGACCAAGGATGATGCGATCGTCTCCAACGCGTCCTGCACGACGAATTGTCTGGCTCCGGTGGCG
GCGGTTCTGGACAAGGCGGTCGGTATCAAAACCGGCTACATGACCACCATCCATGCCTATACCGGCGATCAGCCATCGCA
TGACGCCGCGCACAAAGACCCCTACCGTGGGCGGGCAGCAGCCCTGTCGATGGTACCGACCTCAACAGGGGCCGCCAAGG
CCATCGCGCTGGTTCTGCCGCGCCTTGAGGGGCGTCTTGAAGGGTCCGCAGTGCGGGTCCCGACACCGAATGTATCCCTC
GTGGACCTCAGCTTTGTGCCGGAGAAAGACACGAGCGCCGATGAGATCAACGCCGCGATCAAAGCCGCCGCCGAGGGGCC
GATGCGGGGGGTTCTGTCCTATGAAACGGACCCGATGGTATCCATTGATTTCAACCACGATTCGCATTCGTCCTGCTTTG
CCGCGCCGCAAACCAAAGTGACGCGCGACGGGCTGGTGCGTGTCGTGACGTGGTATGACAATGAGTGGGGTTTTGCCAAT
CGCATGATCGATACTGGACGCAAACTGGCGACACTGGCCAAAAGCTGA

Protein sequence :
MSHQVGINGFGRIGRGVLRALVENRISDVEVVAINDLSSPETLAHLLKYDSVHGRFQGDVEVQGDALIVNGKPIRVSALR
DPAELPWGDVDVAMECTGFFTARDKAALHLKNGSGRVLISAPGADADRTVVFGVNDHELTKDDAIVSNASCTTNCLAPVA
AVLDKAVGIKTGYMTTIHAYTGDQPSHDAAHKDPYRGRAAALSMVPTSTGAAKAIALVLPRLEGRLEGSAVRVPTPNVSL
VDLSFVPEKDTSADEINAAIKAAAEGPMRGVLSYETDPMVSIDFNHDSHSSCFAAPQTKVTRDGLVRVVTWYDNEWGFAN
RMIDTGRKLATLAKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 6e-66 46