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Name : glcD (RD1_0625) Accession : YP_681011.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 605531 - 606985 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGTCGATGGAGATGCCTGTACCTGATGCCGCGATTCTGGCCCGCAAGGCGCGGCTGGTGGAGCGTCTGCAATCCGTGGT TCCAGCCGATGCGGTCATCCATGATCCGCACCAAACACGCGCTTACGAGTGTGACGCACTGACGGCGTATAAATGCCCGC CGATGGCTGTTGTGTTGCCGGCGTCCACCAAAGAGGTGTCGGATGTGCTGCGCATTTGTCACGAGGATGGCGTGCCCGTC GTGCCGCGCGGCTCTGGTACGTCTCTGGCCGGGGGGGCTTTGCCCACGGCGGATTGCGTGATCCTTGGCGTGGCGCGCAT GAATGACGTGCTGGAAACGAATTATGACGACCGCTACATCCGCGTGGAATCGGGGCGCACGAACCTCAGCGTGACCGGCG CCGTGGAAGAAGACGGGTTCTTTTACGCGCCCGACCCTTCCAGCCAGTTGGCCTGTGCCATAGCGGGCAACATCGCGATG AATTCAGGCGGTGCGCATTGCCTGAAATATGGCGTGACCACCAACAACCTGATGGGCGTGACGCTCGTGATGATGGATGG CGAAATCGTCGAGGTGGGCGGCGCGCATATGGATTCGGCGGGTCTCGATCTGCTCGGTCTGATCTGTGGTTCCGAAGGGC AGTTGGGCGTCGTGACCGAAGCCACCCTGCGGATTTTGCCCAAACCCGAAGGCGCGCGACCCGTCCTTATGGGGTTTGAC GACAGTGAGGTTGCGGGCGCCTGTGTCAGCGACATCATCAAGGCGGGCGTCCTGCCGGTTGCGATTGAATTCATGGACCG GCTGTGCATCGAGACGAGCGAAAATTTCGCACAGGCAGGCTATCCGATGTGCGAGGCGTTGCTGATCGTCGAGGTCGAAG GATCAGAGGCCGAGATCGACCATCAACTGGACCTCATCATGGAGATCGCGCGCCGCCATGACCCGGTCGAATTGCGCCAA AGCACCTCTGCGGAGGAAAGCGCGTTGATCTGGCTGGGGCGGAAATCCGCCTTTGGGGCCATCGGGCAAATCAACGATTA CATGTGTCTGGATGGGACGATCCCGGTATCTTCGCTGCCTTTCGTCTTGCGCCGCATTGGCGAGATGTCCAAAGAGTTCG GCCTGCAGGTCGGCAATGTGTTTCATGCGGGGGACGGCAACATGCACCCGTTGATCCTGTTTGATGCCAACAAGCCGGGT GATCTGGAACGCTGCGAAGCGCTTGGCGCGGAAATCCTCAAGCTCTGTGTCGAAGCGGGCGGATGCCTGACCGGAGAACA CGGTGTCGGGATCGAAAAGCGTGACCTGATGGAATACCAATTCGCGCCCGACGATCTGGAGGCGCAGATGGCCATCAAGG ACGTGTTCGATGCCCAATGGCTGTTGAACCCGGCCAAAGTCTTTCCGCTTTCCGTTTCACAAAACCGTCGGATGCTTGCC ATTGCGGCGCAGTAA Protein sequence : MSMEMPVPDAAILARKARLVERLQSVVPADAVIHDPHQTRAYECDALTAYKCPPMAVVLPASTKEVSDVLRICHEDGVPV VPRGSGTSLAGGALPTADCVILGVARMNDVLETNYDDRYIRVESGRTNLSVTGAVEEDGFFYAPDPSSQLACAIAGNIAM NSGGAHCLKYGVTTNNLMGVTLVMMDGEIVEVGGAHMDSAGLDLLGLICGSEGQLGVVTEATLRILPKPEGARPVLMGFD DSEVAGACVSDIIKAGVLPVAIEFMDRLCIETSENFAQAGYPMCEALLIVEVEGSEAEIDHQLDLIMEIARRHDPVELRQ STSAEESALIWLGRKSAFGAIGQINDYMCLDGTIPVSSLPFVLRRIGEMSKEFGLQVGNVFHAGDGNMHPLILFDANKPG DLERCEALGAEILKLCVEAGGCLTGEHGVGIEKRDLMEYQFAPDDLEAQMAIKDVFDAQWLLNPAKVFPLSVSQNRRMLA IAAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 7e-102 | 47 |
