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Name : glcF (RD1_0627) Accession : YP_681013.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : glycolate oxidase, iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : 1.1.3.15 Position : 608182 - 609507 bp Length : 1326 bp Strand : + Note : - DNA sequence : ATGCAGACAACATTCACACCGGAGCAGATGAAAAACCCGGAAATCCAGCGCAGCAACGAGATTTTGCGCTCCTGCGTGCA TTGCGGGTTCTGCACCGCCACCTGCCCGACCTATCAGGTGCTCGGGGATGAATTGGACAGCCCGCGCGGGCGGATTTATC TGATCAAGGATATGCTTGAGAACGACCGTGATCCGGATGCGAAAACGGTCAAACATATTGACCGCTGCCTGTCCTGTCTT GCCTGCATGACCACCTGCCCGTCGGGCGTGCATTACATGCATCTGGTCGATCACGCGCGCGCCTACATCGAAGAACGTTA CAAGCGGCCGTTCAGTGACCGCGCGCTGCGTTGGGTTCTGGCGCGTATCCTGCCCTATCCCATGCGGTTCCGTCTGGCCC TGCTGGGTGCCAAGATCGGGCGTCCTTTTGCACGGTTTATGCCGGATGCGCGGTTGCAAGCCATGCTGGAGATGGCGCCC AAGACCATCCCGCCCGTCAGCCGCAATGACGATCCGCAGAGTTTTGCACCGGAGATTGAACGTAAAAAACGCGTGGCCCT GATGACCGGCTGTGCGCAAAAGGCGCTGAATACCGACATCAATGACGCGACGATCCGCGTGCTGCGGCGTTTGGGCTGCG AGGTTGTCGTGGCCAAAGGGGCGGGTTGTTGTGGCGCTCTGACCCATCACATGGGCAAGTCAGATGAAAGCCACTCAACG GCGGCGCGCAATATTCGCGCATGGGCGCGGGAAATGGATGCGGGCGGTCTGGACGCGATTGTGATCAATACATCCGGCTG TGGGACGACCGTGAAAGACTACGGTCATATGTTTCGCAACGATCCGGCCTTGGCAGAGGATGCCGCGCGCGTCTCGGCGA TTGCCAAAGATGTCTCCGAAGTGCTGGTTGATCTGGACATGCCTGCCGGTGAGGACAAGGCGATGGTCGTGGGGTATCAC GCGGCCTGCTCGCTGCAACACGGTCAACAGATCAAGACCTTCCCAAAGGATTTGTTGAAACGCGCCGGTTTTACCGTCGT CGAGCCGCGCGATTCGCATCTGTGCTGTGGCTCTGCGGGGACATACAACCTGATGCAGCCAGAGATTTCCAAACAGCTCA AAGCGCGCAAGGTGCAAACGCTGGAGGCGAAAAACCCGGACGTCATCGCGGCAGGTAATATCGGGTGCATGATGCAAATC GGCTCTGGCACTGAGATTCCAGTGGTTCACAGTGTTGAATTGCTGGACTGGGCCACGGGCGGGCCGAGGCCACCGTCGCT GGATGGCGATGCGATGCCAAAATCCGACGTGCCGATCCTGCGCTGA Protein sequence : MQTTFTPEQMKNPEIQRSNEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLENDRDPDAKTVKHIDRCLSCL ACMTTCPSGVHYMHLVDHARAYIEERYKRPFSDRALRWVLARILPYPMRFRLALLGAKIGRPFARFMPDARLQAMLEMAP KTIPPVSRNDDPQSFAPEIERKKRVALMTGCAQKALNTDINDATIRVLRRLGCEVVVAKGAGCCGALTHHMGKSDESHST AARNIRAWAREMDAGGLDAIVINTSGCGTTVKDYGHMFRNDPALAEDAARVSAIAKDVSEVLVDLDMPAGEDKAMVVGYH AACSLQHGQQIKTFPKDLLKRAGFTVVEPRDSHLCCGSAGTYNLMQPEISKQLKARKVQTLEAKNPDVIAAGNIGCMMQI GSGTEIPVVHSVELLDWATGGPRPPSLDGDAMPKSDVPILR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 4e-82 | 43 |
