Gene Information

Name : rrsA (RD1_0727)
Accession : -
Strain : Roseobacter denitrificans OCh 114
Genome accession: NC_008209
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 703242 - 704705 bp
Length : 1464 bp
Strand : +
Note : -

DNA sequence :
TCAACTTGAGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGCTCACTTCGGT
GGGAGCGGCGGACGGGTTAGTAACGCGTGGGAACATACCCTTCTCTACGGAATAGCCTTTGGAAACGAAGAGTAATACCG
TATACGCCCTTCGGGGGAAAGATTTATCGGAGATGGATTGGCCCGCGTTAGATTAGATAGTTGGTGGGGTAATGGCCTAC
CAAGTCTACGATCTATAGCTGGTTTTAGAGGACGATCAGCAACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGG
CAGCAGTGGGGAATCTTAGACAATGGGCGAAAGCCTGATCTAGCCATGCCGCGTGAGTGATGAAGGCCCTAGGGTCGTAA
AGCTCTTTCGCCAGGGATGATAATGACAGTACCTGGTAAAGAAACCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATAC
GGAGGGGGTTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATCAGAAAGTTAGGGGTGAAATCCCGAG
GCTCAACCTCGGAACTGCCTCTAAAACTCCTGGTCTTGAGTTCGAGAGAGGTGAGTGGAATTCCAAGTGTAGAGGTGAAA
TTCGTAGATATTTGGAGGAACACCAGTGGCGAAGGCGGCTCACTGGCTCGATACTGACGCTGAGGTGCGAAAGTGTGGGG
AGCAAACAGGATTAGATACCCTGGTAGTCCACACCGTAAACGATGAATGCCAGTCGTCGGGCAGTATACTGTTCGGTGAC
ACACCTAACGGATTAAGCATTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACA
AGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAACCCTTGACATCCTGTGCTAACCCGAGAGAT
CGGGCGTTCTCGCAAGAGACGCAGTGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTCGGTTAAGTCC
GGCAACGAGCGCAACCCACATCTTTAGTTGCCAGCAGTTCGGCTGGGCACTCTAAAGAAACTGCCCGTGATAAGCGGGAG
GAAGGTGTGGATGACGTCAAGTCCTCATGGCCCTTACGGGTTGGGCTACACACGTGCTACAATGGTAGTGACAATGGGTT
AATCCCCAAAAGCTATCTCAGTTCGGATTGGGGTCTGCAACTCGACCCCATGAAGTCGGAATCGCTAGTAATCGCGTAAC
AGCATGACGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTGGTTCTACCCGACGACGC
TGCGCTAACCCTTCGGGGAGGCAGGCGGCCACGGTAGGATCAGCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGG
AACCTGCGGCTGGATCACCTCCTT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA 6e-93 86.1
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA 6e-93 86.1
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA 6e-93 85.9
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA 6e-93 85.9
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA 6e-93 85.9
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA 6e-93 85.9