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Name : Patl_1235 (Patl_1235) Accession : YP_660815.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 1484105 - 1484830 bp Length : 726 bp Strand : + Note : TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pha:PSHAa2673 tRNA/rRNA methyltransferase DNA sequence : ATGCTAGAAAATATTAAAATCGTACTGGTTAATACATCCCACACCGGCAATATTGGTTCAACAGCGCGCGCCATGAAAAC CATGGGCTTGAGCCAATTGGTTTTGGTTGATCCAGTATCACCGCCCGACGGTAAATCTAGCGCGTTAGCTGCTGGGGCTG GGGATGTTCTGGCCAACGCGAAAATTGTCTCTACCGTGGCAGAAGCAGTAGCGGATTGTGGTTTAGTGGTCGGCACAAGT GCCCGTTCGCGAACGTTATCTTGGCCTATGCTTGAACCTCGCGAATGCGGCGAAAAGTTAGTATCCGAAGTACCTAAATA TCCTGTTGCCTTAGTATTTGGCCGTGAGAACAACGGCTTGAGTAACGAGGAGCTACAGCAATGTCATTTTCATGTATGTA TTCCCGCCAATCCTGAATATAGCTCGTTGAACTTGGCTGCTGCTGTACAAACACTATGTTACGAAATTCGCATGGCGCAT CTTAATGAAACGCGACGAGAGGCGAATGTGCAGGAAGAATACCCGCTGGCGGATGATCTTGAAGGCTTTTATAGCCATTT GGAACAAACCCTTCACAAAACGAATTTCATCATTCCGCAACATCCAGGTATGGTCATGACCAAATTACGTCGCTTGTTTA ATCGTGCTCGTCCTGAAACCCAGGAGCTGAACATATTGCGCGGCATATTGGCATCTATCGAAAAGTCCAGCAAAGACAAT ACATAA Protein sequence : MLENIKIVLVNTSHTGNIGSTARAMKTMGLSQLVLVDPVSPPDGKSSALAAGAGDVLANAKIVSTVAEAVADCGLVVGTS ARSRTLSWPMLEPRECGEKLVSEVPKYPVALVFGRENNGLSNEELQQCHFHVCIPANPEYSSLNLAAAVQTLCYEIRMAH LNETRREANVQEEYPLADDLEGFYSHLEQTLHKTNFIIPQHPGMVMTKLRRLFNRARPETQELNILRGILASIEKSSKDN T |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 8e-64 | 52 |
