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Name : Patl_1238 (Patl_1238) Accession : YP_660818.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : cysteine desulfurase IscS Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 1486264 - 1487487 bp Length : 1224 bp Strand : + Note : TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase, class V aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ppr:PBPRA0750 putative aminotransferase NifS, class V DNA sequence : ATGAGCGACATTAAGTTACCAATTTATTTAGATTATTCATCAACCACCCCGGTTGACCCTCGTGTTGCTGCCAAAATGGC AGAGTGTTTAACCAACGAAGGCAACTTTGGTAACCCTGCATCGCGTTCTCACCGTTTCGGTTGGGTAGCAGAAGAAGCAG TCGACGTTGCTCGTAATCAAATTGCTGATTTGATCAATGCAGATCCTCGTGAAATTGTTTTCACCTCTGGCGCAACAGAA TCAAATAACCTTGCAATTAAAGGCGCTGCACATTTTTACGGCAAGAAAGGTAAGCACCTCATCACAGTGAAAACTGAGCA TAAAGCCGTACTTGATACGTGCCGCCAGTTAGAGCGTGAAGGGTTTGAAGTGACGTATTTAGATCCTGAGCCAAATGGTT TGGTTGATATCGAAAAATTCACAGCAGCCATCCGCCCAGACACGATTCTTGCTAGTGTGATGCACGTAAACAACGAGATT GGCGTGATCCAAGACATCGCTGCTATCGGAGAAGTGTGCCGCGAGCGTAAAGTGTTGTTCCATGTTGACGCTGCGCAAAG CACAGGCAAAGTGGCAATCGATTTACAAGCGCTGAAAGTAGACATGATGTCCTTCTCAGCACATAAATCTTACGGTCCCA AGGGGATTGGAGCACTTTACGTTAGTCGTAAGCCTCGCGTTCGTCTTGAAGCGCAAATGCACGGTGGCGGCCATGAGCGT GGTATGCGCTCTGGTACCATGGCAACTCATCAAATTGTAGGTATGGGTGAAGCATTCCGTATCGCACAGGAAGAAATGGC CACCGAGAACGAACGTATTCTAATGCTACGTAATCGCTTATGGGATGGAATCAAAGATATTGAAGCGGTTTACATCAATG GTGACATTGAACAACGCGTTGCAGCGAACTTAAATGTGAGTTTTGCATTCGTTGAAGGTGAGTCTTTGATCATGGCCCTT AAAGATATGGCCGTATCATCTGGTTCAGCTTGTACATCAGCCAGCTTAGAGCCGTCTTATGTACTTCGCGCGCTTGGTTT GAATGATGAATTGGCCCATAGCTCAATTCGTTTCACAATCGGCCGTTTTACCACCGAAGCTGAAATCGACCATGTGATAA GCGTAGTACGTAACGCAATCGACAAATTACGTGATATGTCTCCTTTGTGGGATATGTACAAAGAAGGCATTGATTTGAAT ACCGTTGAGTGGGCACACCACTAG Protein sequence : MSDIKLPIYLDYSSTTPVDPRVAAKMAECLTNEGNFGNPASRSHRFGWVAEEAVDVARNQIADLINADPREIVFTSGATE SNNLAIKGAAHFYGKKGKHLITVKTEHKAVLDTCRQLEREGFEVTYLDPEPNGLVDIEKFTAAIRPDTILASVMHVNNEI GVIQDIAAIGEVCRERKVLFHVDAAQSTGKVAIDLQALKVDMMSFSAHKSYGPKGIGALYVSRKPRVRLEAQMHGGGHER GMRSGTMATHQIVGMGEAFRIAQEEMATENERILMLRNRLWDGIKDIEAVYINGDIEQRVAANLNVSFAFVEGESLIMAL KDMAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTIGRFTTEAEIDHVISVVRNAIDKLRDMSPLWDMYKEGIDLN TVEWAHH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 3e-147 | 75 |
