Gene Information

Name : Patl_1543 (Patl_1543)
Accession : YP_661119.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1851381 - 1851587 bp
Length : 207 bp
Strand : +
Note : PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: cps:CPS_4529 cold-shock DNA-binding domain family protein

DNA sequence :
ATGTCTACTACTACTGGTACAGTTAAATGGTTCAACGAATCTAAAGGTTTTGGTTTCATTCAGCAAGAAAATGGTCCTGA
CGTATTTGCTCACTTCCGTGCAATTACTGGTACTGGCTTCAAAACACTAGCTGAAGGCCAAAAAGTTGAGTTCACTGTAA
CTCAAGGCCAAAAAGGTCCTCAAGCAGAGAATATCGTAGTACTTTAA

Protein sequence :
MSTTTGTVKWFNESKGFGFIQQENGPDVFAHFRAITGTGFKTLAEGQKVEFTVTQGQKGPQAENIVVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 8e-15 55