Gene Information

Name : Patl_1717 (Patl_1717)
Accession : YP_661292.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : anion transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0471
EC number : -
Position : 2052442 - 2053818 bp
Length : 1377 bp
Strand : +
Note : TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter Citrate transporter; KEGG: ilo:IL2396 Na+/dicarboxylate symporter

DNA sequence :
ATGCGATTAAACCGTCAGCACTTTATTTTAATAGGTCCTTTACTGGCGATACTGTTTTACGGATTTTTACGGTACTCACA
GGTCGAATACTTACCGGCAGTGACTGCCGCTATTACTGCATTAACGGTTATTTGGTGGGTCAGTGAAGCCATTCCTATTC
CCGCTACCTCTATCGTCCCTTTCGCACTGTTACCCATGTTTGGTGTGCTTGATCATGGCATAGCGGCATCAGCGTTGGGC
AGTCACGTTATTTTACTGCTGATGGGGGCTTTTATGTTATCAACCGCACTAGAGCGCAGCGGCGCCCATGAGCGTCTCGC
TGTGTATATGGTGCGTTTGGTAGGCGTGAGTAGCGGCCGGCGATTAGTGATGGGGTTTGTATTGGCGACTGGGTTCCTAA
GTATGTGGATATCCAATACGGCCACCGTACTGATCATTCTGCCCATGGCATTAGCTGTGCTGTCACACGTAGATAACCCA
AAACTGAAAGTGGCGTTGATTTTAGGGATTGCATACTCTGCCAGTGTCGGCGGCTTAGGGACTCTCATCGGCACACCGCC
CAACGTGATATTTGCCGGTATTTATCAAGAGCAAACAGGGCAAGAATTTGGCTTTTTGGCGTGGATGAAAGTAGGCGTTC
CCGTTGTTATTGTTAGCCTTCCGATTATCGCCCTGTGGCTAACCCGCAATGTTACCCTGGAGCATGATATTGAATTGCCT
ACCTTGGGTGCTTGGCGAAAAGAAGAATCCCGTACCTTGTGGGTGTTTGGTTTAACGGCCTTAGCATGGATAACGCGCAA
TGAGCCTTTCGGCGGCTGGAGCGGTTGGTTTGATATTCCATACGCGGGTGACAGCACCATCGCATTGACCGCTGCAGTAG
TGATGTTCATTGTGCCAAATGGGAAAGGCAGCAGATTGCTCGACTGGGAAACAGCAAAAAGGATCCCTTGGGGCATACTG
CTGCTATTTGCAGGTGGTATTGCTTTGGCTAAGGGCTTTAGCGCATCAGGGTTGAGCCAAATCTTAGGAGAGTGGCTACT
TAGCTTGACGAATTTACCGCTGGTGATGGTTATTTTAGCTATTTGCTTAATCGTGACTTACCTAACGGAGATCACCAGTA
ACACAGCAACCGCGACTTTGCTGATGCCTATTCTCGCTGTTGCCGCGGTTTCTTCAGGTAACGACCCTGCTTTATTTATG
ATCCCCGCCGCTATGGCTGCTAGTTGTGCCTTTATGCTTCCCGTTGCGACTGCACCCAATGCAATTGCCTACGGTACTGG
GGAGATCACCATAAAAGACATGGTCAAAGAAGGGGCTATTTTAAGCTTCTTGATCTCCAGCATAGTGGGGTTAATGTGTT
ATGCATTGCTGCGATGA

Protein sequence :
MRLNRQHFILIGPLLAILFYGFLRYSQVEYLPAVTAAITALTVIWWVSEAIPIPATSIVPFALLPMFGVLDHGIAASALG
SHVILLLMGAFMLSTALERSGAHERLAVYMVRLVGVSSGRRLVMGFVLATGFLSMWISNTATVLIILPMALAVLSHVDNP
KLKVALILGIAYSASVGGLGTLIGTPPNVIFAGIYQEQTGQEFGFLAWMKVGVPVVIVSLPIIALWLTRNVTLEHDIELP
TLGAWRKEESRTLWVFGLTALAWITRNEPFGGWSGWFDIPYAGDSTIALTAAVVMFIVPNGKGSRLLDWETAKRIPWGIL
LLFAGGIALAKGFSASGLSQILGEWLLSLTNLPLVMVILAICLIVTYLTEITSNTATATLLMPILAVAAVSSGNDPALFM
IPAAMAASCAFMLPVATAPNAIAYGTGEITIKDMVKEGAILSFLISSIVGLMCYALLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0179 NP_938571.1 hypothetical protein Not tested Not named Protein 7e-49 42