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Name : rnhA (Patl_2365) Accession : YP_661935.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 2880192 - 2880653 bp Length : 462 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAAACACATAGAAATTTATACTGACGGTTCTTGCCTGGGTAATCCAGGGCCAGGTGGTTATGGCGCGGTGCTATTATT CAATCAGCACAGTAAGGAATTAAGCCAGGGCTTTGTTCACACCACGAATAATCGAATGGAGCTGCTGGCCACGATTGAAG CATTAGCTAGCCTAACAGAGACGTGTAAAGTTGATTTAACCACCGACAGTCAATATGTAAAAAACGGCATCAATCAATGG ATAAAGAATTGGCGCAAGAATGGTTGGCGTACATCAGATAAAAAACCGGTTAAGAACGTTGATTTATGGAAACGCTTGGA TGAGCAAGTTGGTCGACATGACGTCAAATGGCATTGGGTAAAAGGCCATTCGGGGCACCCCATGAACGAACGATGCGACG TGTTAGCACGAGATGCGGCGTCAGGTAAGAGTTTATTACCCGATGAAGGGTTTCAAGGATAA Protein sequence : MKHIEIYTDGSCLGNPGPGGYGAVLLFNQHSKELSQGFVHTTNNRMELLATIEALASLTETCKVDLTTDSQYVKNGINQW IKNWRKNGWRTSDKKPVKNVDLWKRLDEQVGRHDVKWHWVKGHSGHPMNERCDVLARDAASGKSLLPDEGFQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-46 | 66 |
