Gene Information

Name : Patl_2596 (Patl_2596)
Accession : YP_662165.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase, type I
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : -
Position : 3153601 - 3154614 bp
Length : 1014 bp
Strand : -
Note : KEGG: bte:BTH_I1196 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase

DNA sequence : 
ATGGCTATCAATATTGCGATAAATGGTTTCGGACGTATAGGGCGCATGGTCACGCGAGCTCTTTATGAATCTGAACGAGC
AGATGAACTGCGCATCGTAGCGATAAACGACCTAGGTGATGCAAGCACCAATGCGCTATTGCTAAAACATGATACAGCGC
ACGGAACCTTCCAAACAGAGGTACGTGTTGATGGTGATAACATCATTATCGGCAATGACGAGGTGCGAGTGTTTAAAGAG
CGAGATCCATCGAAATTACCCTGGAGCGAGTTGAATGTAGACATCGTTTTAGAATGCACTGGCTTATTTCGCACCAGAGA
AACGGCACAAATGCACATTGATGCGGGTGCAAAGAAAGTGCTATTGGCCGCTCCGGCAAGAGACAGCATTGATGCAACAA
TCGTATTTGGCGTTAACGACGACACGCTGTTGGCTGAGCATACAATCGTATCGAACGCATCATGCACCACCAATTGCTTA
GCACCATTAGTAAAGCCACTGCACGAGGCGATTGGCATAGAAAGCGGCACGATGACCACCATCCACGCCTACACAAATGA
TCAAGTGCTCACCGATGTATATCACAAGGATATTCGTCGGGCGCGCTCTGCAACGATGTCGATGATCCCCACTAAAACCG
GAGCTGCTACGGCAGTGGGCCTTGTGCTACCCGCATTAGATGGCAAACTCAAAGGCTTCGCGGTTCGCGTTCCTGTCATT
AATGTATCCATGGTGGATTTAACGTTTATCGCCAGTCGTGCTACCACTATTGACGAAATCCACTCTATTATGCGCACGGC
AAGTAATGGGGCGCTAAAAGGGGTACTTGAATATTGTGATGAATTACTGGTATCTACTGATTTCAACCATAATTCAGCGT
CTTCCATTTTTGATGCGAGCTTAACCAATGTGATAGACGGAAAACTGGTTAAGGTGTGTGCTTGGTATGATAACGAATGG
GGATTTTCTAACCGGATGTTAGATACCGCTCTCGCCTTAGCCAAGGCATCTTGA

Protein sequence : 
MAINIAINGFGRIGRMVTRALYESERADELRIVAINDLGDASTNALLLKHDTAHGTFQTEVRVDGDNIIIGNDEVRVFKE
RDPSKLPWSELNVDIVLECTGLFRTRETAQMHIDAGAKKVLLAAPARDSIDATIVFGVNDDTLLAEHTIVSNASCTTNCL
APLVKPLHEAIGIESGTMTTIHAYTNDQVLTDVYHKDIRRARSATMSMIPTKTGAATAVGLVLPALDGKLKGFAVRVPVI
NVSMVDLTFIASRATTIDEIHSIMRTASNGALKGVLEYCDELLVSTDFNHNSASSIFDASLTNVIDGKLVKVCAWYDNEW
GFSNRMLDTALALAKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 1e-81 49