|
Name : Patl_3250 (Patl_3250) Accession : YP_662810.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : periplasmic protein thiol--disulfide oxidoreductase DsbE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0526 EC number : - Position : 3899684 - 3900256 bp Length : 573 bp Strand : - Note : TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin; KEGG: pha:PSHAa0828 thiol:disulfide interchange protein DsbE (cytochrome c biogenesis protein CcmG) DNA sequence : ATGAGAAAGATTTCGTTATTCGTATTGCCTTTAATTCTGTTTGTGGGCTTAGCGATATTTTTATTTCAAGGGTTGTTTAG TAACCCAAGAGAGCACGAATCAACCTTGTTGAACAAACCCGTTCCGAGTTTTGTATTGCCTGATCTAATGGATACCGATT TAACCTACACCACAGAAGTGTTTGTGGGCAAGGTAACCCTGCTTAACGTGTGGGGCGTGTGGTGCGTTACCTGCGCTGTG GAAATTCCGTTTTTAGAACAGTTAAAAAACGAGGGTAAACACATAGTCGGTTTGTATTACGATCAGGATATTGACCCAGA TTTTGGCATTAAAACCGTCGAAAGAGTGCAGCAAGAAGTTGAGCAGAAACTTGGTCAATTAGGTGATCCTTACGCCTACA ATATTTTTGATGTAAAGCGTGACCTATCATTAGATTTAGGTGTTACGGGTGCTCCTGAGACTTTCTTAATCGACAAACAA GGTAAAGTGCGTTTACACCACATTGGCGATATTAACCCTAGAGTGTGGCAGAACAAGTTTGAGTCTGTATATCAGGAGTT GATTGCTGAATGA Protein sequence : MRKISLFVLPLILFVGLAIFLFQGLFSNPREHESTLLNKPVPSFVLPDLMDTDLTYTTEVFVGKVTLLNVWGVWCVTCAV EIPFLEQLKNEGKHIVGLYYDQDIDPDFGIKTVERVQQEVEQKLGQLGDPYAYNIFDVKRDLSLDLGVTGAPETFLIDKQ GKVRLHHIGDINPRVWQNKFESVYQELIAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmG | YP_217240.1 | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis | Not tested | SPI-12 | Protein | 7e-26 | 43 |
